RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 FRAT2O75474 233 aaPredicted RBP11.46□□□□□ -0.58
XCR1-201ENST00000309285 EXOSC9Q06265 439 aaKnown RBP11.46□□□□□ -0.58
XCR1-201ENST00000309285 IQGAP3Q86VI3 1631 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 AMPHP49418 695 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
XCR1-201ENST00000309285 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 APPP05067 770 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 MAGI2Q86UL8 1455 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 PDE3AQ14432 1141 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 WDR63Q8IWG1 891 aa11.45□□□□□ -0.58
XCR1-201ENST00000309285 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
XCR1-201ENST00000309285 TRPM2O94759 1503 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 UNC13BO14795 1591 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 DDX11L8A8MPP1 907 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 PDE4CQ08493 712 aa11.44□□□□□ -0.58
XCR1-201ENST00000309285 FBLN1P23142 703 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 TPM2P07951 284 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
XCR1-201ENST00000309285 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
XCR1-201ENST00000309285 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
XCR1-201ENST00000309285 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
XCR1-201ENST00000309285 PIK3C2GO75747 1445 aa11.42□□□□□ -0.58
XCR1-201ENST00000309285 MCCP23508 829 aa11.42□□□□□ -0.58
XCR1-201ENST00000309285 CEBPAP49715 358 aaPredicted RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 NUDT16Q96DE0 195 aaKnown RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
XCR1-201ENST00000309285 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
XCR1-201ENST00000309285 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 FYB1O15117 783 aa11.42□□□□□ -0.58
XCR1-201ENST00000309285 PRDM15P57071 1507 aaPredicted RBP11.42□□□□□ -0.58
XCR1-201ENST00000309285 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 NKTRP30414 1462 aaKnown RBP11.41□□□□□ -0.58
XCR1-201ENST00000309285 ARAP3Q8WWN8 1544 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 PPP6R1Q9UPN7 881 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 STK31Q9BXU1 1019 aa11.41□□□□□ -0.58
XCR1-201ENST00000309285 RARSP54136 660 aaKnown RBP11.4□□□□□ -0.58
XCR1-201ENST00000309285 NME9Q86XW9 330 aa11.4□□□□□ -0.58
XCR1-201ENST00000309285 TRPM1Q7Z4N2 1603 aa11.4□□□□□ -0.58
XCR1-201ENST00000309285 NEO1Q92859 1461 aa11.4□□□□□ -0.58
XCR1-201ENST00000309285 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
XCR1-201ENST00000309285 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
XCR1-201ENST00000309285 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
XCR1-201ENST00000309285 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
XCR1-201ENST00000309285 WASLO00401 505 aaPredicted RBP11.39□□□□□ -0.59
XCR1-201ENST00000309285 GTF2E1P29083 439 aaPredicted RBP11.39□□□□□ -0.59
XCR1-201ENST00000309285 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
XCR1-201ENST00000309285 GNAI1P63096 354 aa11.39□□□□□ -0.59
XCR1-201ENST00000309285 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
XCR1-201ENST00000309285 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
XCR1-201ENST00000309285 FCHSD2O94868 740 aa11.38□□□□□ -0.59
XCR1-201ENST00000309285 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
XCR1-201ENST00000309285 DMRT2Q9Y5R5 561 aa11.38□□□□□ -0.59
XCR1-201ENST00000309285 MRE11P49959 708 aa11.38□□□□□ -0.59
XCR1-201ENST00000309285 NSD2O96028 1365 aa11.38□□□□□ -0.59
XCR1-201ENST00000309285 SYAP1Q96A49 352 aaPredicted RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 MTERF4Q7Z6M4 381 aaKnown RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 NLRP6P59044 892 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 TET3O43151 1660 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 NOL8Q76FK4 1167 aaKnown RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 NOB1Q9ULX3 412 aaKnown RBP11.37□□□□□ -0.59
XCR1-201ENST00000309285 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
XCR1-201ENST00000309285 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
XCR1-201ENST00000309285 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
XCR1-201ENST00000309285 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
XCR1-201ENST00000309285 FOXD4L5Q5VV16 416 aaPredicted RBP11.36□□□□□ -0.59
XCR1-201ENST00000309285 FOXD4L4Q8WXT5 416 aaPredicted RBP11.36□□□□□ -0.59
XCR1-201ENST00000309285 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 AAMPQ13685 434 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 ATF7IPQ6VMQ6 1270 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 E9PCH4 1651 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 SKOR2Q2VWA4 1001 aaPredicted RBP11.35□□□□□ -0.59
XCR1-201ENST00000309285 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
XCR1-201ENST00000309285 G3V3G9 751 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 TOMM22Q9NS69 142 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 MYOM2P54296 1465 aa11.35□□□□□ -0.59
XCR1-201ENST00000309285 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms