RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 RRP7AQ9Y3A4 280 aaKnown RBP26.32■■□□□ 1.8
SSH3-202ENST00000308298 NEUROD2Q15784 382 aa26.31■■□□□ 1.8
SSH3-202ENST00000308298 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
SSH3-202ENST00000308298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
SSH3-202ENST00000308298 EID1Q9Y6B2 187 aa26.3■■□□□ 1.8
SSH3-202ENST00000308298 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
SSH3-202ENST00000308298 PNPLA6Q8IY17 1366 aa26.3■■□□□ 1.8
SSH3-202ENST00000308298 WDR63Q8IWG1 891 aa26.29■■□□□ 1.8
SSH3-202ENST00000308298 C20orf194Q5TEA3 1177 aa26.29■■□□□ 1.8
SSH3-202ENST00000308298 CCDC61Q9Y6R9 512 aa26.28■■□□□ 1.8
SSH3-202ENST00000308298 MAP2P11137 1827 aaKnown RBP26.28■■□□□ 1.8
SSH3-202ENST00000308298 U2SURPO15042 1029 aaKnown RBP26.27■■□□□ 1.8
SSH3-202ENST00000308298 TOPAZ1Q8N9V7 1692 aa26.25■■□□□ 1.79
SSH3-202ENST00000308298 DIAPH1O60610 1272 aaKnown RBP26.24■■□□□ 1.79
SSH3-202ENST00000308298 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
SSH3-202ENST00000308298 PTPRUQ92729 1446 aa26.24■■□□□ 1.79
SSH3-202ENST00000308298 DIP2AQ14689 1571 aa26.23■■□□□ 1.79
SSH3-202ENST00000308298 PLPPR3Q6T4P5 718 aa26.23■■□□□ 1.79
SSH3-202ENST00000308298 PRR36Q9H6K5 1346 aa26.22■■□□□ 1.79
SSH3-202ENST00000308298 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
SSH3-202ENST00000308298 THEMISQ8N1K5 641 aaPredicted RBP26.21■■□□□ 1.79
SSH3-202ENST00000308298 SLC26A8Q96RN1 970 aa26.21■■□□□ 1.79
SSH3-202ENST00000308298 POLKQ9UBT6 870 aa26.21■■□□□ 1.79
SSH3-202ENST00000308298 BCAR3O75815 825 aa26.2■■□□□ 1.78
SSH3-202ENST00000308298 NME9Q86XW9 330 aa26.19■■□□□ 1.78
SSH3-202ENST00000308298 MAPK8IP3Q9UPT6 1336 aa26.19■■□□□ 1.78
SSH3-202ENST00000308298 ZNF692Q9BU19 519 aaPredicted RBP26.19■■□□□ 1.78
SSH3-202ENST00000308298 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
SSH3-202ENST00000308298 NRKQ7Z2Y5 1582 aa26.18■■□□□ 1.78
SSH3-202ENST00000308298 PNNQ9H307 717 aaKnown RBP26.18■■□□□ 1.78
SSH3-202ENST00000308298 FANCIQ9NVI1 1328 aa26.17■■□□□ 1.78
SSH3-202ENST00000308298 PTCH1Q13635 1447 aa26.17■■□□□ 1.78
SSH3-202ENST00000308298 AATKQ6ZMQ8 1374 aa26.17■■□□□ 1.78
SSH3-202ENST00000308298 TMPOP42166 694 aaKnown RBP26.17■■□□□ 1.78
SSH3-202ENST00000308298 LRRC7Q96NW7 1537 aa26.16■■□□□ 1.78
SSH3-202ENST00000308298 CDK12Q9NYV4 1490 aaPredicted RBP26.16■■□□□ 1.78
SSH3-202ENST00000308298 MYH16Q9H6N6 1097 aa26.16■■□□□ 1.78
SSH3-202ENST00000308298 RIMS1Q86UR5 1692 aaKnown RBP26.15■■□□□ 1.78
SSH3-202ENST00000308298 CEP170BQ9Y4F5 1589 aaPredicted RBP26.15■■□□□ 1.78
SSH3-202ENST00000308298 COG3Q96JB2 828 aa26.14■■□□□ 1.78
SSH3-202ENST00000308298 AMOTL2Q9Y2J4 779 aa26.14■■□□□ 1.78
SSH3-202ENST00000308298 PPM1GO15355 546 aaPredicted RBP26.14■■□□□ 1.77
SSH3-202ENST00000308298 FBLN1P23142 703 aa26.14■■□□□ 1.77
SSH3-202ENST00000308298 XRN1Q8IZH2 1706 aaKnown RBP26.13■■□□□ 1.77
SSH3-202ENST00000308298 ZRANB1Q9UGI0 708 aa26.13■■□□□ 1.77
SSH3-202ENST00000308298 FCHSD2O94868 740 aa26.12■■□□□ 1.77
SSH3-202ENST00000308298 PLEKHG3A1L390 1219 aa26.1■■□□□ 1.77
SSH3-202ENST00000308298 PDE3AQ14432 1141 aa26.1■■□□□ 1.77
SSH3-202ENST00000308298 TRIM35Q9UPQ4 493 aa26.1■■□□□ 1.77
SSH3-202ENST00000308298 EMILIN1Q9Y6C2 1016 aa26.1■■□□□ 1.77
SSH3-202ENST00000308298 TCERG1O14776 1098 aaKnown RBP26.1■■□□□ 1.77
SSH3-202ENST00000308298 RARSP54136 660 aaKnown RBP26.1■■□□□ 1.77
SSH3-202ENST00000308298 KDM2BQ8NHM5 1336 aa26.09■■□□□ 1.77
SSH3-202ENST00000308298 ACEP12821 1306 aa26.08■■□□□ 1.77
SSH3-202ENST00000308298 RSPH6AQ9H0K4 717 aa26.08■■□□□ 1.77
SSH3-202ENST00000308298 CANXP27824 592 aaKnown RBP26.07■■□□□ 1.76
SSH3-202ENST00000308298 IL16Q14005 1332 aa26.07■■□□□ 1.76
SSH3-202ENST00000308298 USP6P35125 1406 aa26.07■■□□□ 1.76
SSH3-202ENST00000308298 TTC21BQ7Z4L5 1316 aa26.06■■□□□ 1.76
SSH3-202ENST00000308298 RIPK4P57078 832 aa26.06■■□□□ 1.76
SSH3-202ENST00000308298 CENPQQ7L2Z9 268 aaPredicted RBP26.06■■□□□ 1.76
SSH3-202ENST00000308298 NALCNQ8IZF0 1738 aa26.06■■□□□ 1.76
SSH3-202ENST00000308298 ZNF142P52746 1687 aaPredicted RBP26.05■■□□□ 1.76
SSH3-202ENST00000308298 NUTM2FA1L443 756 aa26.05■■□□□ 1.76
SSH3-202ENST00000308298 IL13P35225 146 aa26.05■■□□□ 1.76
SSH3-202ENST00000308298 NEFMP07197 916 aa26.04■■□□□ 1.76
SSH3-202ENST00000308298 CT47B1P0C2W7 299 aaPredicted RBP26.04■■□□□ 1.76
SSH3-202ENST00000308298 PRKAR2BP31323 418 aa26.04■■□□□ 1.76
SSH3-202ENST00000308298 OVOS2A0A0J9YW53 1432 aa26.04■■□□□ 1.76
SSH3-202ENST00000308298 OVOS2Q6IE36 1432 aa26.04■■□□□ 1.76
SSH3-202ENST00000308298 RGPD8O14715 1765 aaPredicted RBP26.04■■□□□ 1.76
SSH3-202ENST00000308298 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
SSH3-202ENST00000308298 MS4A1P11836 297 aa26.02■■□□□ 1.76
SSH3-202ENST00000308298 RRS1Q15050 365 aaKnown RBP26.02■■□□□ 1.76
SSH3-202ENST00000308298 TSR2Q969E8 191 aaKnown RBP26.02■■□□□ 1.76
SSH3-202ENST00000308298 ADAMTSL3P82987 1691 aa26.01■■□□□ 1.76
SSH3-202ENST00000308298 FRAT1Q92837 279 aaPredicted RBP26.01■■□□□ 1.75
SSH3-202ENST00000308298 SSH2Q76I76 1423 aa26■■□□□ 1.75
SSH3-202ENST00000308298 HMOX1P09601 288 aa25.99■■□□□ 1.75
SSH3-202ENST00000308298 PANK1Q8TE04 598 aa25.98■■□□□ 1.75
SSH3-202ENST00000308298 EXOSC9Q06265 439 aaKnown RBP25.97■■□□□ 1.75
SSH3-202ENST00000308298 NFE2L2Q16236 605 aa25.97■■□□□ 1.75
SSH3-202ENST00000308298 BCL2L13Q9BXK5 485 aa25.97■■□□□ 1.75
SSH3-202ENST00000308298 COG6Q9Y2V7 657 aa25.96■■□□□ 1.75
SSH3-202ENST00000308298 FMN2Q9NZ56 1722 aa25.96■■□□□ 1.75
SSH3-202ENST00000308298 DLG5Q8TDM6 1919 aa25.96■■□□□ 1.75
SSH3-202ENST00000308298 TTC21AQ8NDW8 1320 aa25.96■■□□□ 1.75
SSH3-202ENST00000308298 CHD2O14647 1828 aaKnown RBP25.95■■□□□ 1.75
SSH3-202ENST00000308298 ANKARQ7Z5J8 1434 aa25.95■■□□□ 1.74
SSH3-202ENST00000308298 KCNA6P17658 529 aa25.95■■□□□ 1.74
SSH3-202ENST00000308298 PHACTR3Q96KR7 559 aa25.95■■□□□ 1.74
SSH3-202ENST00000308298 USP31Q70CQ4 1352 aa25.95■■□□□ 1.74
SSH3-202ENST00000308298 MSH5O43196 834 aa25.94■■□□□ 1.74
SSH3-202ENST00000308298 PEAK1Q9H792 1746 aa25.93■■□□□ 1.74
SSH3-202ENST00000308298 CLUAP1Q96AJ1 413 aa25.93■■□□□ 1.74
SSH3-202ENST00000308298 SETD1BQ9UPS6 1966 aaKnown RBP25.92■■□□□ 1.74
SSH3-202ENST00000308298 AAMPQ13685 434 aa25.92■■□□□ 1.74
SSH3-202ENST00000308298 PMFBP1Q8TBY8 1022 aa25.92■■□□□ 1.74
SSH3-202ENST00000308298 ANKLE2Q86XL3 938 aa25.91■■□□□ 1.74
SSH3-202ENST00000308298 PDE4AP27815 886 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms