RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
PTCD2-201ENST00000308077 NALCNQ8IZF0 1738 aa9.48□□□□□ -0.89
PTCD2-201ENST00000308077 MRS2Q9HD23 443 aa9.47□□□□□ -0.89
PTCD2-201ENST00000308077 PRR36Q9H6K5 1346 aa9.47□□□□□ -0.89
PTCD2-201ENST00000308077 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
PTCD2-201ENST00000308077 TNS2Q63HR2 1409 aa9.46□□□□□ -0.89
PTCD2-201ENST00000308077 PPIP5K1Q6PFW1 1433 aa9.46□□□□□ -0.89
PTCD2-201ENST00000308077 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.89
PTCD2-201ENST00000308077 AKAP12Q02952 1782 aa9.46□□□□□ -0.89
PTCD2-201ENST00000308077 HSPA6P17066 643 aa9.46□□□□□ -0.89
PTCD2-201ENST00000308077 CDC42BPGQ6DT37 1551 aa9.46□□□□□ -0.9
PTCD2-201ENST00000308077 RGPD8O14715 1765 aaPredicted RBP9.46□□□□□ -0.9
PTCD2-201ENST00000308077 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
PTCD2-201ENST00000308077 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
PTCD2-201ENST00000308077 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
PTCD2-201ENST00000308077 BRD4O60885 1362 aaPredicted RBP9.45□□□□□ -0.9
PTCD2-201ENST00000308077 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
PTCD2-201ENST00000308077 MEX3CQ5U5Q3 659 aaKnown RBP9.45□□□□□ -0.9
PTCD2-201ENST00000308077 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
PTCD2-201ENST00000308077 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
PTCD2-201ENST00000308077 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
PTCD2-201ENST00000308077 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
PTCD2-201ENST00000308077 NLRP13Q86W25 1043 aa9.44□□□□□ -0.9
PTCD2-201ENST00000308077 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
PTCD2-201ENST00000308077 PPP2R1AP30153 589 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 CGNL1Q0VF96 1302 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 HDGFL2Q7Z4V5 671 aaPredicted RBP9.43□□□□□ -0.9
PTCD2-201ENST00000308077 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 BLMP54132 1417 aaPredicted RBP9.43□□□□□ -0.9
PTCD2-201ENST00000308077 ADGRL3Q9HAR2 1447 aa9.43□□□□□ -0.9
PTCD2-201ENST00000308077 NRKQ7Z2Y5 1582 aa9.42□□□□□ -0.9
PTCD2-201ENST00000308077 NSD2O96028 1365 aa9.42□□□□□ -0.9
PTCD2-201ENST00000308077 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
PTCD2-201ENST00000308077 ANKARQ7Z5J8 1434 aa9.41□□□□□ -0.9
PTCD2-201ENST00000308077 PHLPP1O60346 1717 aa9.41□□□□□ -0.9
PTCD2-201ENST00000308077 ROBO1Q9Y6N7 1651 aa9.41□□□□□ -0.9
PTCD2-201ENST00000308077 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
PTCD2-201ENST00000308077 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
PTCD2-201ENST00000308077 FYB1O15117 783 aa9.4□□□□□ -0.9
PTCD2-201ENST00000308077 CENPBP07199 599 aaPredicted RBP9.4□□□□□ -0.9
PTCD2-201ENST00000308077 MORC1Q86VD1 984 aa9.4□□□□□ -0.91
PTCD2-201ENST00000308077 GGNBP2Q9H3C7 697 aa9.4□□□□□ -0.91
PTCD2-201ENST00000308077 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
PTCD2-201ENST00000308077 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
PTCD2-201ENST00000308077 NGLY1Q96IV0 654 aa9.39□□□□□ -0.91
PTCD2-201ENST00000308077 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
PTCD2-201ENST00000308077 ACEP12821 1306 aa9.39□□□□□ -0.91
PTCD2-201ENST00000308077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTCD2-201ENST00000308077 WWC3Q9ULE0 1092 aa9.39□□□□□ -0.91
PTCD2-201ENST00000308077 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-201ENST00000308077 TNNT2P45379 298 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-201ENST00000308077 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-201ENST00000308077 USP6P35125 1406 aa9.38□□□□□ -0.91
PTCD2-201ENST00000308077 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTCD2-201ENST00000308077 PMFBP1Q8TBY8 1022 aa9.37□□□□□ -0.91
PTCD2-201ENST00000308077 SSH2Q76I76 1423 aa9.37□□□□□ -0.91
PTCD2-201ENST00000308077 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
PTCD2-201ENST00000308077 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
PTCD2-201ENST00000308077 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
PTCD2-201ENST00000308077 NME9Q86XW9 330 aa9.36□□□□□ -0.91
PTCD2-201ENST00000308077 CAMTA1Q9Y6Y1 1673 aa9.36□□□□□ -0.91
PTCD2-201ENST00000308077 C14orf37Q86TY3 774 aa9.36□□□□□ -0.91
PTCD2-201ENST00000308077 TTC21BQ7Z4L5 1316 aa9.35□□□□□ -0.91
PTCD2-201ENST00000308077 NCOA3Q9Y6Q9 1424 aa9.35□□□□□ -0.91
PTCD2-201ENST00000308077 PIK3C2AO00443 1686 aa9.34□□□□□ -0.91
PTCD2-201ENST00000308077 MAP2P11137 1827 aaKnown RBP9.34□□□□□ -0.91
PTCD2-201ENST00000308077 MARF1Q9Y4F3 1742 aaKnown RBP9.34□□□□□ -0.91
PTCD2-201ENST00000308077 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
PTCD2-201ENST00000308077 MTHFSP49914 203 aa9.34□□□□□ -0.91
PTCD2-201ENST00000308077 NGDNQ8NEJ9 315 aaKnown RBP9.34□□□□□ -0.91
PTCD2-201ENST00000308077 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
PTCD2-201ENST00000308077 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
PTCD2-201ENST00000308077 C19orf44Q9H6X5 657 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 PHF8Q9UPP1 1060 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 DCCP43146 1447 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 AFF2P51816 1311 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
PTCD2-201ENST00000308077 C1orf167Q5SNV9 1468 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 INSRP06213 1382 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 FBLN1P23142 703 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 USP54Q70EL1 1684 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 MST1RQ04912 1400 aa9.33□□□□□ -0.92
PTCD2-201ENST00000308077 ZBED9Q6R2W3 1325 aa9.32□□□□□ -0.92
PTCD2-201ENST00000308077 TTC21AQ8NDW8 1320 aa9.32□□□□□ -0.92
PTCD2-201ENST00000308077 KIF1AQ12756 1690 aa9.32□□□□□ -0.92
PTCD2-201ENST00000308077 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
PTCD2-201ENST00000308077 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
PTCD2-201ENST00000308077 COG3Q96JB2 828 aa9.31□□□□□ -0.92
PTCD2-201ENST00000308077 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
PTCD2-201ENST00000308077 SMG6Q86US8 1419 aaKnown RBP9.31□□□□□ -0.92
PTCD2-201ENST00000308077 WDR43Q15061 677 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTCD2-201ENST00000308077 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
PTCD2-201ENST00000308077 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
PTCD2-201ENST00000308077 TRPM3Q9HCF6 1732 aaPredicted RBP9.3□□□□□ -0.92
PTCD2-201ENST00000308077 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
PTCD2-201ENST00000308077 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
PTCD2-201ENST00000308077 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms