RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 XPCQ01831 940 aaPredicted RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CAVIN1Q6NZI2 390 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 NOL7Q9UMY1 257 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CLEC17AQ6ZS10 378 aa23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF445P59923 1031 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 MCTP1Q6DN14 999 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF500O60304 480 aaPredicted RBP23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ARID3AQ99856 593 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF518AQ6AHZ1 1483 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ZSCAN23Q3MJ62 389 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CHRNB1-201ENST00000306071 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.34
CHRNB1-201ENST00000306071 AK9Q5TCS8 1911 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 ANKRD45Q5TZF3 282 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
CHRNB1-201ENST00000306071 RBSNQ9H1K0 784 aa23.37■■□□□ 1.33
CHRNB1-201ENST00000306071 PTPRTO14522 1441 aa23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 IPO8O15397 1037 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
CHRNB1-201ENST00000306071 CSPP1Q1MSJ5 1256 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 MTERF4Q7Z6M4 381 aaKnown RBP23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 PDLIM2Q96JY6 352 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
CHRNB1-201ENST00000306071 DYNC1I1O14576 645 aa23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 ZKSCAN5Q9Y2L8 839 aa23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 NUCB2P80303 420 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 LMBRD1Q9NUN5 540 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 ABCA6Q8N139 1617 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 SMAP1Q8IYB5 467 aaPredicted RBP23.3■■□□□ 1.32
CHRNB1-201ENST00000306071 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
CHRNB1-201ENST00000306071 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ADGRL1O94910 1474 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 NOS1P29475 1434 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 GCC1Q96CN9 775 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ARHGAP31Q2M1Z3 1444 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ADGRB2O60241 1585 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 PRPF40AO75400 957 aaKnown RBP23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 MCM5P33992 734 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 CDC45O75419 566 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 SASS6Q6UVJ0 657 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 TRAK1Q9UPV9 953 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 CCDC39Q9UFE4 941 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 RABEP1Q15276 862 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 PKP1Q13835 747 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 PRDM10Q9NQV6 1147 aa23.25■■□□□ 1.31
CHRNB1-201ENST00000306071 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
CHRNB1-201ENST00000306071 MYOM2P54296 1465 aa23.24■■□□□ 1.31
CHRNB1-201ENST00000306071 PPIP5K1Q6PFW1 1433 aa23.24■■□□□ 1.31
CHRNB1-201ENST00000306071 CYP2E1P05181 493 aaPredicted RBP23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 MYO3AQ8NEV4 1616 aa23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 IL16Q14005 1332 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 SYCE3A1L190 88 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 LRSAM1Q6UWE0 723 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 ZBTB7BO15156 539 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 TET3O43151 1660 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 PTMAP06454 111 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 ZHX1Q9UKY1 873 aaPredicted RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 CHMP4BQ9H444 224 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 TMEM63CQ9P1W3 806 aa23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 RNF214Q8ND24 703 aa23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 CCDC94Q9BW85 323 aaPredicted RBP23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
CHRNB1-201ENST00000306071 DNTTIP2Q5QJE6 756 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 ZGPATQ8N5A5 531 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 QRICH2Q9H0J4 1663 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 AFAP1Q8N556 730 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 MED14O60244 1454 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 NSD2O96028 1365 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 ST18O60284 1047 aa23.14■■□□□ 1.3
CHRNB1-201ENST00000306071 SIRT2Q8IXJ6 389 aa23.14■■□□□ 1.3
CHRNB1-201ENST00000306071 CHAMP1Q96JM3 812 aa23.14■■□□□ 1.29
CHRNB1-201ENST00000306071 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
CHRNB1-201ENST00000306071 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms