RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.18
DDX54-201ENST00000306014 DIAPH3Q9NSV4 1193 aa16.21■□□□□ 0.18
DDX54-201ENST00000306014 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
DDX54-201ENST00000306014 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
DDX54-201ENST00000306014 SEC24BO95487 1268 aa16.19■□□□□ 0.18
DDX54-201ENST00000306014 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
DDX54-201ENST00000306014 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
DDX54-201ENST00000306014 HTATSF1O43719 755 aaKnown RBP16.19■□□□□ 0.18
DDX54-201ENST00000306014 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
DDX54-201ENST00000306014 DNMT1P26358 1616 aaKnown RBP16.18■□□□□ 0.18
DDX54-201ENST00000306014 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
DDX54-201ENST00000306014 CCDC173Q0VFZ6 552 aa16.18■□□□□ 0.18
DDX54-201ENST00000306014 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
DDX54-201ENST00000306014 UHRF1BP1Q6BDS2 1440 aa16.17■□□□□ 0.18
DDX54-201ENST00000306014 FCHSD2O94868 740 aa16.17■□□□□ 0.18
DDX54-201ENST00000306014 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
DDX54-201ENST00000306014 ARHGEF12Q9NZN5 1544 aa16.17■□□□□ 0.18
DDX54-201ENST00000306014 TXNDC2Q86VQ3 553 aa16.17■□□□□ 0.18
DDX54-201ENST00000306014 KDM6BO15054 1643 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 RLBP1P12271 317 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
DDX54-201ENST00000306014 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 SULT6B1Q6IMI4 303 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
DDX54-201ENST00000306014 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
DDX54-201ENST00000306014 SMC3Q9UQE7 1217 aa16.15■□□□□ 0.18
DDX54-201ENST00000306014 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
DDX54-201ENST00000306014 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
DDX54-201ENST00000306014 TEFQ10587 303 aa16.14■□□□□ 0.17
DDX54-201ENST00000306014 THEMISQ8N1K5 641 aaPredicted RBP16.14■□□□□ 0.17
DDX54-201ENST00000306014 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
DDX54-201ENST00000306014 CCDC9Q9Y3X0 531 aaKnown RBP16.14■□□□□ 0.17
DDX54-201ENST00000306014 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
DDX54-201ENST00000306014 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
DDX54-201ENST00000306014 ZKSCAN1P17029 563 aaPredicted RBP16.14■□□□□ 0.17
DDX54-201ENST00000306014 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
DDX54-201ENST00000306014 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
DDX54-201ENST00000306014 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
DDX54-201ENST00000306014 GNL2Q13823 731 aaKnown RBP16.13■□□□□ 0.17
DDX54-201ENST00000306014 MBD3O95983 291 aa16.13■□□□□ 0.17
DDX54-201ENST00000306014 ERC2O15083 957 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
DDX54-201ENST00000306014 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
DDX54-201ENST00000306014 MPNDQ8N594 471 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 COL17A1Q9UMD9 1497 aaPredicted RBP16.12■□□□□ 0.17
DDX54-201ENST00000306014 ATAD2Q6PL18 1390 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 GCC2Q8IWJ2 1684 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
DDX54-201ENST00000306014 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
DDX54-201ENST00000306014 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
DDX54-201ENST00000306014 H3BQV1 296 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
DDX54-201ENST00000306014 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
DDX54-201ENST00000306014 SSFA2P28290 1259 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 CCDC39Q9UFE4 941 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 NOS1P29475 1434 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
DDX54-201ENST00000306014 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 SYCP2Q9BX26 1530 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 GNAI3P08754 354 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 TPM2P07951 284 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 XRCC6P12956 609 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX54-201ENST00000306014 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 GNAI2P04899 355 aa16.1■□□□□ 0.17
DDX54-201ENST00000306014 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
DDX54-201ENST00000306014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.09■□□□□ 0.17
DDX54-201ENST00000306014 MCM2P49736 904 aa16.09■□□□□ 0.17
DDX54-201ENST00000306014 ABCC11Q96J66 1382 aa16.08■□□□□ 0.17
DDX54-201ENST00000306014 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.17
DDX54-201ENST00000306014 GORABQ5T7V8 394 aa16.08■□□□□ 0.17
DDX54-201ENST00000306014 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.16
DDX54-201ENST00000306014 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
DDX54-201ENST00000306014 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
DDX54-201ENST00000306014 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
DDX54-201ENST00000306014 TSPY26PQ9H489 355 aa16.08■□□□□ 0.16
DDX54-201ENST00000306014 A2MP01023 1474 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
DDX54-201ENST00000306014 HDAC1Q13547 482 aaPredicted RBP16.07■□□□□ 0.16
DDX54-201ENST00000306014 ZNF518AQ6AHZ1 1483 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 BECN2A8MW95 431 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 FIBPO43427 364 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
DDX54-201ENST00000306014 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
DDX54-201ENST00000306014 SF3A1Q15459 793 aaKnown RBP16.07■□□□□ 0.16
DDX54-201ENST00000306014 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
DDX54-201ENST00000306014 FBLN1P23142 703 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 ADGRL2O95490 1459 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 EXOC6BQ9Y2D4 811 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 ZNF592Q92610 1267 aa16.06■□□□□ 0.16
DDX54-201ENST00000306014 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms