RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 CABP2Q9NPB3 220 aa23.71■■□□□ 1.39
CTNND2-201ENST00000304623 TBC1D2BQ9UPU7 963 aa23.71■■□□□ 1.39
CTNND2-201ENST00000304623 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.39
CTNND2-201ENST00000304623 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
CTNND2-201ENST00000304623 STK38Q15208 465 aa23.7■■□□□ 1.38
CTNND2-201ENST00000304623 WDR33Q9C0J8 1336 aaKnown RBP23.7■■□□□ 1.38
CTNND2-201ENST00000304623 K7ELQ4 463 aaPredicted RBP23.7■■□□□ 1.38
CTNND2-201ENST00000304623 GNAI2P04899 355 aa23.7■■□□□ 1.38
CTNND2-201ENST00000304623 LEKR1Q6ZMV7 388 aa23.7■■□□□ 1.38
CTNND2-201ENST00000304623 TWISTNBQ3B726 338 aaPredicted RBP23.7■■□□□ 1.38
CTNND2-201ENST00000304623 TTLL5Q6EMB2 1281 aa23.69■■□□□ 1.38
CTNND2-201ENST00000304623 JMYQ8N9B5 988 aa23.69■■□□□ 1.38
CTNND2-201ENST00000304623 RDXP35241 583 aaKnown RBP23.69■■□□□ 1.38
CTNND2-201ENST00000304623 GRPEL1Q9HAV7 217 aa23.69■■□□□ 1.38
CTNND2-201ENST00000304623 HSP90AB2PQ58FF8 381 aa23.69■■□□□ 1.38
CTNND2-201ENST00000304623 SYTL4Q96C24 671 aaPredicted RBP23.68■■□□□ 1.38
CTNND2-201ENST00000304623 FMNL2Q96PY5 1086 aa23.68■■□□□ 1.38
CTNND2-201ENST00000304623 MAGEC2Q9UBF1 373 aaPredicted RBP23.68■■□□□ 1.38
CTNND2-201ENST00000304623 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
CTNND2-201ENST00000304623 ANKRD1Q15327 319 aa23.68■■□□□ 1.38
CTNND2-201ENST00000304623 TXLNAP40222 546 aa23.68■■□□□ 1.38
CTNND2-201ENST00000304623 RBM33Q96EV2 1170 aaKnown RBP23.68■■□□□ 1.38
CTNND2-201ENST00000304623 CIZ1Q9ULV3 898 aaPredicted RBP23.67■■□□□ 1.38
CTNND2-201ENST00000304623 CYP46A1Q9Y6A2 500 aa23.67■■□□□ 1.38
CTNND2-201ENST00000304623 ZNF644Q9H582 1327 aaPredicted RBP23.67■■□□□ 1.38
CTNND2-201ENST00000304623 NOB1Q9ULX3 412 aaKnown RBP23.66■■□□□ 1.38
CTNND2-201ENST00000304623 RRBP1Q9P2E9 1410 aaKnown RBP23.66■■□□□ 1.38
CTNND2-201ENST00000304623 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
CTNND2-201ENST00000304623 MSH5O43196 834 aa23.66■■□□□ 1.38
CTNND2-201ENST00000304623 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
CTNND2-201ENST00000304623 IGF1RP08069 1367 aa23.66■■□□□ 1.38
CTNND2-201ENST00000304623 SPC24Q8NBT2 197 aa23.65■■□□□ 1.38
CTNND2-201ENST00000304623 DNAJC2Q99543 621 aaKnown RBP23.65■■□□□ 1.38
CTNND2-201ENST00000304623 CCDC112Q8NEF3 446 aa23.65■■□□□ 1.38
CTNND2-201ENST00000304623 RBM10P98175 930 aaKnown RBP23.64■■□□□ 1.38
CTNND2-201ENST00000304623 KIF21BO75037 1637 aa23.64■■□□□ 1.38
CTNND2-201ENST00000304623 FYB1O15117 783 aa23.64■■□□□ 1.37
CTNND2-201ENST00000304623 IL27Q8NEV9 243 aa23.64■■□□□ 1.37
CTNND2-201ENST00000304623 TNMDQ9H2S6 317 aa23.64■■□□□ 1.37
CTNND2-201ENST00000304623 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
CTNND2-201ENST00000304623 KRT85P78386 507 aa23.63■■□□□ 1.37
CTNND2-201ENST00000304623 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
CTNND2-201ENST00000304623 DACH1Q9UI36 760 aa23.63■■□□□ 1.37
CTNND2-201ENST00000304623 C1orf115Q9H7X2 142 aa23.63■■□□□ 1.37
CTNND2-201ENST00000304623 ZNHIT6Q9NWK9 470 aaKnown RBP23.63■■□□□ 1.37
CTNND2-201ENST00000304623 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
CTNND2-201ENST00000304623 AXDND1Q5T1B0 1012 aaPredicted RBP23.63■■□□□ 1.37
CTNND2-201ENST00000304623 AKNAQ7Z591 1439 aa23.62■■□□□ 1.37
CTNND2-201ENST00000304623 SERPINC1P01008 464 aa23.62■■□□□ 1.37
CTNND2-201ENST00000304623 BCAR3O75815 825 aa23.62■■□□□ 1.37
CTNND2-201ENST00000304623 ATP2B1P20020 1258 aa23.62■■□□□ 1.37
CTNND2-201ENST00000304623 ZFYVE27Q5T4F4 411 aa23.62■■□□□ 1.37
CTNND2-201ENST00000304623 NLRP2Q9NX02 1062 aa23.61■■□□□ 1.37
CTNND2-201ENST00000304623 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
CTNND2-201ENST00000304623 TSPYL1Q9H0U9 437 aa23.61■■□□□ 1.37
CTNND2-201ENST00000304623 NLRP6P59044 892 aa23.6■■□□□ 1.37
CTNND2-201ENST00000304623 LRRCC1Q9C099 1032 aa23.6■■□□□ 1.37
CTNND2-201ENST00000304623 NCOA2Q15596 1464 aa23.6■■□□□ 1.37
CTNND2-201ENST00000304623 CDK5RAP3Q96JB5 506 aa23.6■■□□□ 1.37
CTNND2-201ENST00000304623 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
CTNND2-201ENST00000304623 SLC3A2P08195 630 aaKnown RBP23.6■■□□□ 1.37
CTNND2-201ENST00000304623 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
CTNND2-201ENST00000304623 MVPQ14764 893 aaKnown RBP23.59■■□□□ 1.37
CTNND2-201ENST00000304623 PPFIBP1Q86W92 1011 aa23.59■■□□□ 1.37
CTNND2-201ENST00000304623 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
CTNND2-201ENST00000304623 MCM4P33991 863 aa23.59■■□□□ 1.37
CTNND2-201ENST00000304623 SRCIN1Q9C0H9 1055 aa23.59■■□□□ 1.37
CTNND2-201ENST00000304623 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
CTNND2-201ENST00000304623 CEBPZQ03701 1054 aaKnown RBP23.59■■□□□ 1.37
CTNND2-201ENST00000304623 CBFA2T2O43439 604 aa23.58■■□□□ 1.37
CTNND2-201ENST00000304623 ERLIN1O75477 346 aa23.58■■□□□ 1.37
CTNND2-201ENST00000304623 ATF7IPQ6VMQ6 1270 aa23.58■■□□□ 1.37
CTNND2-201ENST00000304623 PLEKHO1Q53GL0 409 aaPredicted RBP23.58■■□□□ 1.37
CTNND2-201ENST00000304623 LUC7LQ9NQ29 371 aaKnown RBP23.58■■□□□ 1.37
CTNND2-201ENST00000304623 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
CTNND2-201ENST00000304623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.58■■□□□ 1.36
CTNND2-201ENST00000304623 ERLIN2O94905 339 aa23.57■■□□□ 1.36
CTNND2-201ENST00000304623 KDM4AO75164 1064 aa23.57■■□□□ 1.36
CTNND2-201ENST00000304623 CCAR1Q8IX12 1150 aaKnown RBP23.57■■□□□ 1.36
CTNND2-201ENST00000304623 TXLNBQ8N3L3 684 aa23.57■■□□□ 1.36
CTNND2-201ENST00000304623 CHD1LQ86WJ1 897 aa23.57■■□□□ 1.36
CTNND2-201ENST00000304623 HFM1A2PYH4 1435 aa23.57■■□□□ 1.36
CTNND2-201ENST00000304623 ESPNB1AK53 854 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
CTNND2-201ENST00000304623 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 PDIA4P13667 645 aaKnown RBP23.56■■□□□ 1.36
CTNND2-201ENST00000304623 ME1P48163 572 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 CCDC158Q5M9N0 1113 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 UQCRHLA0A096LP55 91 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 EIF3JO75822 258 aaKnown RBP23.56■■□□□ 1.36
CTNND2-201ENST00000304623 UQCRHP07919 91 aa23.56■■□□□ 1.36
CTNND2-201ENST00000304623 ZSCAN31Q96LW9 406 aaPredicted RBP23.56■■□□□ 1.36
CTNND2-201ENST00000304623 LARP1BQ659C4 914 aaKnown RBP23.55■■□□□ 1.36
CTNND2-201ENST00000304623 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.55■■□□□ 1.36
CTNND2-201ENST00000304623 GOLGA6L10A6NI86 522 aa23.54■■□□□ 1.36
CTNND2-201ENST00000304623 STIM1Q13586 685 aa23.54■■□□□ 1.36
CTNND2-201ENST00000304623 TRIM22Q8IYM9 498 aa23.54■■□□□ 1.36
CTNND2-201ENST00000304623 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
CTNND2-201ENST00000304623 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms