RNA–Protein interactions for RNA: ENST00000302909.3

KCNK3-201, Transcript of potassium two pore domain channel subfamily K member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK3, Length 6,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK3-201ENST00000302909 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
KCNK3-201ENST00000302909 API5Q9BZZ5 524 aaKnown RBP20.46■□□□□ 0.87
KCNK3-201ENST00000302909 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
KCNK3-201ENST00000302909 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
KCNK3-201ENST00000302909 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
KCNK3-201ENST00000302909 PTPN14Q15678 1187 aa20.45■□□□□ 0.86
KCNK3-201ENST00000302909 UBXN4Q92575 508 aa20.45■□□□□ 0.86
KCNK3-201ENST00000302909 CIZ1Q9ULV3 898 aaPredicted RBP20.44■□□□□ 0.86
KCNK3-201ENST00000302909 NFXL1Q6ZNB6 911 aa20.44■□□□□ 0.86
KCNK3-201ENST00000302909 KIF21BO75037 1637 aa20.44■□□□□ 0.86
KCNK3-201ENST00000302909 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
KCNK3-201ENST00000302909 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
KCNK3-201ENST00000302909 GDPD2Q9HCC8 539 aa20.44■□□□□ 0.86
KCNK3-201ENST00000302909 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
KCNK3-201ENST00000302909 ZSCAN23Q3MJ62 389 aa20.43■□□□□ 0.86
KCNK3-201ENST00000302909 DNAJC2Q99543 621 aaKnown RBP20.43■□□□□ 0.86
KCNK3-201ENST00000302909 WDR33Q9C0J8 1336 aaKnown RBP20.43■□□□□ 0.86
KCNK3-201ENST00000302909 ADCY5O95622 1261 aa20.43■□□□□ 0.86
KCNK3-201ENST00000302909 MLECQ14165 292 aa20.43■□□□□ 0.86
KCNK3-201ENST00000302909 NBPF1Q3BBV0 1214 aa20.43■□□□□ 0.86
KCNK3-201ENST00000302909 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
KCNK3-201ENST00000302909 LRRCC1Q9C099 1032 aa20.42■□□□□ 0.86
KCNK3-201ENST00000302909 NUP62CLQ9H1M0 184 aa20.42■□□□□ 0.86
KCNK3-201ENST00000302909 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
KCNK3-201ENST00000302909 USP8P40818 1118 aa20.42■□□□□ 0.86
KCNK3-201ENST00000302909 LMAN1P49257 510 aa20.41■□□□□ 0.86
KCNK3-201ENST00000302909 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
KCNK3-201ENST00000302909 ERLIN1O75477 346 aa20.41■□□□□ 0.86
KCNK3-201ENST00000302909 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
KCNK3-201ENST00000302909 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
KCNK3-201ENST00000302909 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
KCNK3-201ENST00000302909 ERC2O15083 957 aa20.39■□□□□ 0.86
KCNK3-201ENST00000302909 AAMPQ13685 434 aa20.39■□□□□ 0.85
KCNK3-201ENST00000302909 NBPF8Q3BBV2 869 aa20.39■□□□□ 0.85
KCNK3-201ENST00000302909 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.39■□□□□ 0.85
KCNK3-201ENST00000302909 V9GYY5 206 aaPredicted RBP20.39■□□□□ 0.85
KCNK3-201ENST00000302909 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
KCNK3-201ENST00000302909 URI1O94763 535 aaPredicted RBP20.38■□□□□ 0.85
KCNK3-201ENST00000302909 ATP2B1P20020 1258 aa20.38■□□□□ 0.85
KCNK3-201ENST00000302909 CLIP2Q9UDT6 1046 aa20.38■□□□□ 0.85
KCNK3-201ENST00000302909 CNTROBQ8N137 903 aa20.38■□□□□ 0.85
KCNK3-201ENST00000302909 AMPHP49418 695 aa20.37■□□□□ 0.85
KCNK3-201ENST00000302909 SPATA32Q96LK8 384 aa20.37■□□□□ 0.85
KCNK3-201ENST00000302909 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
KCNK3-201ENST00000302909 MCM2P49736 904 aa20.37■□□□□ 0.85
KCNK3-201ENST00000302909 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
KCNK3-201ENST00000302909 ME1P48163 572 aa20.36■□□□□ 0.85
KCNK3-201ENST00000302909 ODF2Q5BJF6 829 aa20.36■□□□□ 0.85
KCNK3-201ENST00000302909 SMARCE1Q969G3 411 aa20.36■□□□□ 0.85
KCNK3-201ENST00000302909 GTPBP4Q9BZE4 634 aaKnown RBP20.36■□□□□ 0.85
KCNK3-201ENST00000302909 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
KCNK3-201ENST00000302909 SMAP1Q8IYB5 467 aaPredicted RBP20.35■□□□□ 0.85
KCNK3-201ENST00000302909 CASQ1P31415 396 aa20.35■□□□□ 0.85
KCNK3-201ENST00000302909 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
KCNK3-201ENST00000302909 LARP1BQ659C4 914 aaKnown RBP20.35■□□□□ 0.85
KCNK3-201ENST00000302909 MAP3K11Q16584 847 aa20.34■□□□□ 0.85
KCNK3-201ENST00000302909 CCDC183Q5T5S1 534 aa20.34■□□□□ 0.85
KCNK3-201ENST00000302909 KRT85P78386 507 aa20.34■□□□□ 0.85
KCNK3-201ENST00000302909 RNF187Q5TA31 235 aaPredicted RBP20.34■□□□□ 0.85
KCNK3-201ENST00000302909 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
KCNK3-201ENST00000302909 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
KCNK3-201ENST00000302909 GOLGA6L10A6NI86 522 aa20.33■□□□□ 0.85
KCNK3-201ENST00000302909 PSMA5P28066 241 aa20.33■□□□□ 0.85
KCNK3-201ENST00000302909 STK38Q15208 465 aa20.33■□□□□ 0.85
KCNK3-201ENST00000302909 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.85
KCNK3-201ENST00000302909 IGHDP01880 384 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
KCNK3-201ENST00000302909 NOLC1Q14978 699 aaKnown RBP eCLIP20.32■□□□□ 0.84
KCNK3-201ENST00000302909 CEP135Q66GS9 1140 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 LRRFIP2Q9Y608 721 aaKnown RBP20.32■□□□□ 0.84
KCNK3-201ENST00000302909 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 FSD1Q9BTV5 496 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 HDAC5Q9UQL6 1122 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 SHTN1A0MZ66 631 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 TAX1BP1Q86VP1 789 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
KCNK3-201ENST00000302909 UPF3BQ9BZI7 483 aaKnown RBP20.32■□□□□ 0.84
KCNK3-201ENST00000302909 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
KCNK3-201ENST00000302909 PPFIBP1Q86W92 1011 aa20.31■□□□□ 0.84
KCNK3-201ENST00000302909 CCDC181Q5TID7 509 aa20.31■□□□□ 0.84
KCNK3-201ENST00000302909 PRIMPOLQ96LW4 560 aa20.31■□□□□ 0.84
KCNK3-201ENST00000302909 KIF3BO15066 747 aa20.31■□□□□ 0.84
KCNK3-201ENST00000302909 MINK1Q8N4C8 1332 aaPredicted RBP20.3■□□□□ 0.84
KCNK3-201ENST00000302909 PDIA4P13667 645 aaKnown RBP20.3■□□□□ 0.84
KCNK3-201ENST00000302909 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
KCNK3-201ENST00000302909 MTHFSP49914 203 aa20.3■□□□□ 0.84
KCNK3-201ENST00000302909 MNAT1P51948 309 aa20.3■□□□□ 0.84
KCNK3-201ENST00000302909 DYDC1Q8WWB3 177 aa20.3■□□□□ 0.84
KCNK3-201ENST00000302909 FILIP1LQ4L180 1135 aa20.29■□□□□ 0.84
KCNK3-201ENST00000302909 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
KCNK3-201ENST00000302909 CCDC47Q96A33 483 aaKnown RBP20.29■□□□□ 0.84
KCNK3-201ENST00000302909 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
KCNK3-201ENST00000302909 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
KCNK3-201ENST00000302909 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
KCNK3-201ENST00000302909 OFD1O75665 1012 aa20.29■□□□□ 0.84
KCNK3-201ENST00000302909 C10orf67Q8IYJ2 551 aa20.28■□□□□ 0.84
KCNK3-201ENST00000302909 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms