RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 GNAI2P04899 355 aa25.34■■□□□ 1.65
LETM1-201ENST00000302787 MVPQ14764 893 aaKnown RBP25.34■■□□□ 1.65
LETM1-201ENST00000302787 BRPF3Q9ULD4 1205 aa25.34■■□□□ 1.65
LETM1-201ENST00000302787 R3HCC1Q9Y3T6 440 aaKnown RBP25.33■■□□□ 1.65
LETM1-201ENST00000302787 LETM1O95202 739 aaPredicted RBP25.33■■□□□ 1.65
LETM1-201ENST00000302787 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.64
LETM1-201ENST00000302787 RAD21O60216 631 aa25.32■■□□□ 1.64
LETM1-201ENST00000302787 DHX16O60231 1041 aaKnown RBP25.32■■□□□ 1.64
LETM1-201ENST00000302787 NAT10Q9H0A0 1025 aaKnown RBP25.31■■□□□ 1.64
LETM1-201ENST00000302787 SLC4A2P04920 1241 aa25.31■■□□□ 1.64
LETM1-201ENST00000302787 CDK19Q9BWU1 502 aa25.31■■□□□ 1.64
LETM1-201ENST00000302787 NAIPQ13075 1403 aa25.31■■□□□ 1.64
LETM1-201ENST00000302787 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
LETM1-201ENST00000302787 TSPY26PQ9H489 355 aa25.3■■□□□ 1.64
LETM1-201ENST00000302787 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
LETM1-201ENST00000302787 CABP1Q9NZU7 370 aa25.29■■□□□ 1.64
LETM1-201ENST00000302787 NESP48681 1621 aa25.29■■□□□ 1.64
LETM1-201ENST00000302787 SDF4Q9BRK5 362 aa25.29■■□□□ 1.64
LETM1-201ENST00000302787 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
LETM1-201ENST00000302787 HIP1O00291 1037 aa25.28■■□□□ 1.64
LETM1-201ENST00000302787 TRIM34Q9BYJ4 488 aa25.28■■□□□ 1.64
LETM1-201ENST00000302787 SULT6B1Q6IMI4 303 aa25.27■■□□□ 1.64
LETM1-201ENST00000302787 TEX35Q5T0J7 233 aa25.27■■□□□ 1.64
LETM1-201ENST00000302787 CCT4P50991 539 aaKnown RBP25.26■■□□□ 1.64
LETM1-201ENST00000302787 MNS1Q8NEH6 495 aa25.26■■□□□ 1.64
LETM1-201ENST00000302787 DNAJC2Q99543 621 aaKnown RBP25.26■■□□□ 1.64
LETM1-201ENST00000302787 ATF3P18847 181 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 PLEKHO1Q53GL0 409 aaPredicted RBP25.26■■□□□ 1.63
LETM1-201ENST00000302787 OLFM4Q6UX06 510 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 ERC1Q8IUD2 1116 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 TXNDC2Q86VQ3 553 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
LETM1-201ENST00000302787 CCDC173Q0VFZ6 552 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 CHD1LQ86WJ1 897 aa25.26■■□□□ 1.63
LETM1-201ENST00000302787 PDCP20941 246 aa25.25■■□□□ 1.63
LETM1-201ENST00000302787 CWC22Q9HCG8 908 aaKnown RBP25.25■■□□□ 1.63
LETM1-201ENST00000302787 SETQ01105 290 aaPredicted RBP25.24■■□□□ 1.63
LETM1-201ENST00000302787 SLFN5Q08AF3 891 aa25.24■■□□□ 1.63
LETM1-201ENST00000302787 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
LETM1-201ENST00000302787 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
LETM1-201ENST00000302787 LRRCC1Q9C099 1032 aa25.24■■□□□ 1.63
LETM1-201ENST00000302787 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
LETM1-201ENST00000302787 ARGLU1Q9NWB6 273 aaPredicted RBP25.24■■□□□ 1.63
LETM1-201ENST00000302787 TRIM5Q9C035 493 aa25.23■■□□□ 1.63
LETM1-201ENST00000302787 FIBPO43427 364 aa25.23■■□□□ 1.63
LETM1-201ENST00000302787 HDGFL1Q5TGJ6 251 aa25.23■■□□□ 1.63
LETM1-201ENST00000302787 MSH5O43196 834 aa25.22■■□□□ 1.63
LETM1-201ENST00000302787 ZNF692Q9BU19 519 aaPredicted RBP25.21■■□□□ 1.63
LETM1-201ENST00000302787 CDK13Q14004 1512 aaKnown RBP25.21■■□□□ 1.63
LETM1-201ENST00000302787 WWC1Q8IX03 1113 aa25.2■■□□□ 1.63
LETM1-201ENST00000302787 TCEAL9Q9UHQ7 104 aa25.2■■□□□ 1.63
LETM1-201ENST00000302787 KINO60870 393 aaKnown RBP25.2■■□□□ 1.62
LETM1-201ENST00000302787 BRMS1Q9HCU9 246 aa25.2■■□□□ 1.62
LETM1-201ENST00000302787 EPRSP07814 1512 aaKnown RBP25.2■■□□□ 1.62
LETM1-201ENST00000302787 FYB1O15117 783 aa25.19■■□□□ 1.62
LETM1-201ENST00000302787 ANO8Q9HCE9 1232 aaPredicted RBP25.19■■□□□ 1.62
LETM1-201ENST00000302787 PDILTQ8N807 584 aa25.19■■□□□ 1.62
LETM1-201ENST00000302787 IL27Q8NEV9 243 aa25.19■■□□□ 1.62
LETM1-201ENST00000302787 XBP1P17861 261 aa25.19■■□□□ 1.62
LETM1-201ENST00000302787 KDM4AO75164 1064 aa25.18■■□□□ 1.62
LETM1-201ENST00000302787 BCL11BQ9C0K0 894 aaPredicted RBP25.18■■□□□ 1.62
LETM1-201ENST00000302787 ESCO1Q5FWF5 840 aa25.18■■□□□ 1.62
LETM1-201ENST00000302787 TBC1D2BQ9UPU7 963 aa25.18■■□□□ 1.62
LETM1-201ENST00000302787 CYP46A1Q9Y6A2 500 aa25.18■■□□□ 1.62
LETM1-201ENST00000302787 PCF11O94913 1555 aaKnown RBP25.17■■□□□ 1.62
LETM1-201ENST00000302787 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 ANKRD30BQ9BXX2 1392 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 RPGRIP1LQ68CZ1 1315 aa25.17■■□□□ 1.62
LETM1-201ENST00000302787 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
LETM1-201ENST00000302787 NSD3Q9BZ95 1437 aa25.16■■□□□ 1.62
LETM1-201ENST00000302787 MTERF4Q7Z6M4 381 aaKnown RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 ZNF396Q96N95 335 aaPredicted RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 GRPEL1Q9HAV7 217 aa25.15■■□□□ 1.62
LETM1-201ENST00000302787 WDR33Q9C0J8 1336 aaKnown RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 SART3Q15020 963 aaKnown RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 RBM33Q96EV2 1170 aaKnown RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 ATAD2Q6PL18 1390 aa25.15■■□□□ 1.62
LETM1-201ENST00000302787 C11orf95C9JLR9 678 aaPredicted RBP25.15■■□□□ 1.62
LETM1-201ENST00000302787 FCHSD2O94868 740 aa25.14■■□□□ 1.62
LETM1-201ENST00000302787 MAP7D2Q96T17 732 aa25.14■■□□□ 1.62
LETM1-201ENST00000302787 AEBP1Q8IUX7 1158 aa25.14■■□□□ 1.61
LETM1-201ENST00000302787 CTDP1Q9Y5B0 961 aaPredicted RBP25.14■■□□□ 1.61
LETM1-201ENST00000302787 SMC2O95347 1197 aa25.14■■□□□ 1.61
LETM1-201ENST00000302787 MAP4K4O95819 1239 aaPredicted RBP25.14■■□□□ 1.61
LETM1-201ENST00000302787 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
LETM1-201ENST00000302787 NAP1L1P55209 391 aaKnown RBP25.13■■□□□ 1.61
LETM1-201ENST00000302787 ZNF428Q96B54 188 aa25.13■■□□□ 1.61
LETM1-201ENST00000302787 CIZ1Q9ULV3 898 aaPredicted RBP25.12■■□□□ 1.61
LETM1-201ENST00000302787 MCM4P33991 863 aa25.12■■□□□ 1.61
LETM1-201ENST00000302787 TMPOP42166 694 aaKnown RBP25.12■■□□□ 1.61
LETM1-201ENST00000302787 CEBPZQ03701 1054 aaKnown RBP25.12■■□□□ 1.61
LETM1-201ENST00000302787 TMEM57Q8N5G2 664 aa25.12■■□□□ 1.61
LETM1-201ENST00000302787 ACBD3Q9H3P7 528 aa25.11■■□□□ 1.61
LETM1-201ENST00000302787 ANKRD1Q15327 319 aa25.11■■□□□ 1.61
LETM1-201ENST00000302787 STK38Q15208 465 aa25.11■■□□□ 1.61
LETM1-201ENST00000302787 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
LETM1-201ENST00000302787 FMNL2Q96PY5 1086 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms