RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 FYB1O15117 783 aa10.02□□□□□ -0.81
CTNNA1-201ENST00000302763 CDK19Q9BWU1 502 aa10.02□□□□□ -0.81
CTNNA1-201ENST00000302763 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 WASLO00401 505 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 USP6P35125 1406 aa10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 CDK12Q9NYV4 1490 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 COL18A1P39060 1754 aa10.01□□□□□ -0.81
CTNNA1-201ENST00000302763 USP31Q70CQ4 1352 aa10□□□□□ -0.81
CTNNA1-201ENST00000302763 ABCA3Q99758 1704 aa10□□□□□ -0.81
CTNNA1-201ENST00000302763 ANKARQ7Z5J8 1434 aa10□□□□□ -0.81
CTNNA1-201ENST00000302763 PLEKHF1Q96S99 279 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 STK26Q9P289 416 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 TRHP20396 242 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 B4GALNT3Q6L9W6 998 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 AATKQ6ZMQ8 1374 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 TXNDC2Q86VQ3 553 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
CTNNA1-201ENST00000302763 CANXP27824 592 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 ANP32AP39687 249 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 PLPPR3Q6T4P5 718 aa9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 KIF1AQ12756 1690 aa9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 SLIT3O75094 1523 aa9.98□□□□□ -0.81
CTNNA1-201ENST00000302763 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 RGPD5Q99666 1765 aa9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
CTNNA1-201ENST00000302763 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.81
CTNNA1-201ENST00000302763 SIPA1L3O60292 1781 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-201ENST00000302763 SAFB2Q14151 953 aaKnown RBP eCLIP9.96□□□□□ -0.82
CTNNA1-201ENST00000302763 KDM4FA0A1W2PPD8 638 aa9.95□□□□□ -0.82
CTNNA1-201ENST00000302763 FAM208AQ9UK61 1670 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-201ENST00000302763 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-201ENST00000302763 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
CTNNA1-201ENST00000302763 CGNL1Q0VF96 1302 aa9.94□□□□□ -0.82
CTNNA1-201ENST00000302763 SLC26A8Q96RN1 970 aa9.94□□□□□ -0.82
CTNNA1-201ENST00000302763 N4BP2Q86UW6 1770 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-201ENST00000302763 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
CTNNA1-201ENST00000302763 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
CTNNA1-201ENST00000302763 KCNA6P17658 529 aa9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 NCBP3Q53F19 620 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 THEMISQ8N1K5 641 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 NUDCQ9Y266 331 aa9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 ZRANB1Q9UGI0 708 aa9.93□□□□□ -0.82
CTNNA1-201ENST00000302763 NHSL1Q5SYE7 1610 aa9.92□□□□□ -0.82
CTNNA1-201ENST00000302763 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
CTNNA1-201ENST00000302763 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
CTNNA1-201ENST00000302763 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
CTNNA1-201ENST00000302763 FBLN1P23142 703 aa9.9□□□□□ -0.82
CTNNA1-201ENST00000302763 MTHFSP49914 203 aa9.9□□□□□ -0.82
CTNNA1-201ENST00000302763 ARXQ96QS3 562 aa9.9□□□□□ -0.82
CTNNA1-201ENST00000302763 ANP32EQ9BTT0 268 aa9.9□□□□□ -0.82
CTNNA1-201ENST00000302763 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
CTNNA1-201ENST00000302763 GGNBP2Q9H3C7 697 aa9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 PXDNQ92626 1479 aa9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 KDM3BQ7LBC6 1761 aa9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 NME9Q86XW9 330 aa9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
CTNNA1-201ENST00000302763 ACEP12821 1306 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 CCDC27Q2M243 656 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 GLI3P10071 1580 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 HDGFP51858 240 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 SLFN5Q08AF3 891 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 DCCP43146 1447 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 IL13P35225 146 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 NCOA3Q9Y6Q9 1424 aa9.88□□□□□ -0.83
CTNNA1-201ENST00000302763 POGKQ9P215 609 aa9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 ESF1Q9H501 851 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-201ENST00000302763 RSPH6AQ9H0K4 717 aa9.86□□□□□ -0.83
CTNNA1-201ENST00000302763 KDRP35968 1356 aa9.86□□□□□ -0.83
CTNNA1-201ENST00000302763 PKD1L3Q7Z443 1732 aa9.86□□□□□ -0.83
CTNNA1-201ENST00000302763 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 TERF2IPQ9NYB0 399 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 C1orf167Q5SNV9 1468 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 ABCC6O95255 1503 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 TNNT2P45379 298 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
CTNNA1-201ENST00000302763 WNK3Q9BYP7 1800 aa9.84□□□□□ -0.83
CTNNA1-201ENST00000302763 LTBP4Q8N2S1 1624 aa9.84□□□□□ -0.83
CTNNA1-201ENST00000302763 CCDC146Q8IYE0 955 aa9.84□□□□□ -0.83
CTNNA1-201ENST00000302763 ANKLE2Q86XL3 938 aa9.83□□□□□ -0.84
CTNNA1-201ENST00000302763 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
CTNNA1-201ENST00000302763 APAF1O14727 1248 aa9.83□□□□□ -0.84
CTNNA1-201ENST00000302763 COL22A1Q8NFW1 1626 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-201ENST00000302763 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms