RNA–Protein interactions for RNA: ENST00000301740.12

SRRM2-201, Transcript of serine/arginine repetitive matrix 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM2, Length 9,353 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-201ENST00000301740 V9GYY5 206 aaPredicted RBP20.15■□□□□ 0.82
SRRM2-201ENST00000301740 ANKRD1Q15327 319 aa20.15■□□□□ 0.82
SRRM2-201ENST00000301740 TRIM21P19474 475 aaKnown RBP20.14■□□□□ 0.81
SRRM2-201ENST00000301740 C6orf163Q5TEZ5 329 aa20.14■□□□□ 0.81
SRRM2-201ENST00000301740 BRPF3Q9ULD4 1205 aa20.14■□□□□ 0.81
SRRM2-201ENST00000301740 TNMDQ9H2S6 317 aa20.14■□□□□ 0.81
SRRM2-201ENST00000301740 BCCIPQ9P287 314 aaKnown RBP eCLIP20.14■□□□□ 0.81
SRRM2-201ENST00000301740 ZSCAN30Q86W11 494 aa20.14■□□□□ 0.81
SRRM2-201ENST00000301740 ZSCAN12O43309 604 aa20.13■□□□□ 0.81
SRRM2-201ENST00000301740 CCDC175P0C221 793 aa20.13■□□□□ 0.81
SRRM2-201ENST00000301740 GTF2E1P29083 439 aaPredicted RBP20.13■□□□□ 0.81
SRRM2-201ENST00000301740 TICAM2Q86XR7 235 aa20.13■□□□□ 0.81
SRRM2-201ENST00000301740 FAM193AP78312 1265 aa20.13■□□□□ 0.81
SRRM2-201ENST00000301740 ERC1Q8IUD2 1116 aa20.13■□□□□ 0.81
SRRM2-201ENST00000301740 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
SRRM2-201ENST00000301740 GPATCH11Q8N954 259 aa20.12■□□□□ 0.81
SRRM2-201ENST00000301740 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
SRRM2-201ENST00000301740 HMGB1P09429 215 aaKnown RBP20.12■□□□□ 0.81
SRRM2-201ENST00000301740 FILIP1Q7Z7B0 1213 aa20.12■□□□□ 0.81
SRRM2-201ENST00000301740 KIF18AQ8NI77 898 aa20.12■□□□□ 0.81
SRRM2-201ENST00000301740 ZNF397Q8NF99 534 aaPredicted RBP20.12■□□□□ 0.81
SRRM2-201ENST00000301740 LRRFIP2Q9Y608 721 aaKnown RBP20.12■□□□□ 0.81
SRRM2-201ENST00000301740 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
SRRM2-201ENST00000301740 RNF214Q8ND24 703 aa20.12■□□□□ 0.81
SRRM2-201ENST00000301740 CEP57L1Q8IYX8 460 aa20.11■□□□□ 0.81
SRRM2-201ENST00000301740 WDR33Q9C0J8 1336 aaKnown RBP20.11■□□□□ 0.81
SRRM2-201ENST00000301740 DAAM2Q86T65 1068 aa20.11■□□□□ 0.81
SRRM2-201ENST00000301740 CPSF2Q9P2I0 782 aaKnown RBP20.1■□□□□ 0.81
SRRM2-201ENST00000301740 DDX58O95786 925 aaKnown RBP20.1■□□□□ 0.81
SRRM2-201ENST00000301740 GTF2A1P52655 376 aaPredicted RBP20.1■□□□□ 0.81
SRRM2-201ENST00000301740 SLC3A2P08195 630 aaKnown RBP20.1■□□□□ 0.81
SRRM2-201ENST00000301740 MCM5P33992 734 aa20.1■□□□□ 0.81
SRRM2-201ENST00000301740 SPC24Q8NBT2 197 aa20.1■□□□□ 0.81
SRRM2-201ENST00000301740 CRBNQ96SW2 442 aa20.1■□□□□ 0.81
SRRM2-201ENST00000301740 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
SRRM2-201ENST00000301740 G3BP1Q13283 466 aaKnown RBP eCLIP20.09■□□□□ 0.814e-9■□□□□ 9.4
SRRM2-201ENST00000301740 ARHGAP29Q52LW3 1261 aa20.09■□□□□ 0.81
SRRM2-201ENST00000301740 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.81
SRRM2-201ENST00000301740 DYNC1I1O14576 645 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 DDX12PQ92771 950 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 SMTNL1A8MU46 457 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 DDX23Q9BUQ8 820 aaKnown RBP20.08■□□□□ 0.8
SRRM2-201ENST00000301740 EPB41L2O43491 1005 aaKnown RBP20.08■□□□□ 0.8
SRRM2-201ENST00000301740 CETN2P41208 172 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 PAF1Q8N7H5 531 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 ANKS4BQ8N8V4 417 aa20.08■□□□□ 0.8
SRRM2-201ENST00000301740 CUX1P39880 1505 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 DNAI2Q9GZS0 605 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 BBXQ8WY36 941 aaPredicted RBP20.07■□□□□ 0.8
SRRM2-201ENST00000301740 NACADO15069 1562 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 MNAT1P51948 309 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 TAF4BQ92750 862 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SRRM2-201ENST00000301740 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
SRRM2-201ENST00000301740 CCDC83Q8IWF9 413 aa20.06■□□□□ 0.8
SRRM2-201ENST00000301740 KIF5CO60282 957 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 CLGNO14967 610 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 DNAAF4Q8WXU2 420 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 NEMFO60524 1076 aa20.05■□□□□ 0.8
SRRM2-201ENST00000301740 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
SRRM2-201ENST00000301740 PKD2Q13563 968 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 KRT85P78386 507 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 NUP155O75694 1391 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 STK38Q15208 465 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
SRRM2-201ENST00000301740 VPS36Q86VN1 386 aa20.04■□□□□ 0.8
SRRM2-201ENST00000301740 CDKL5O76039 1030 aa20.03■□□□□ 0.8
SRRM2-201ENST00000301740 HSPA4P34932 840 aa20.03■□□□□ 0.8
SRRM2-201ENST00000301740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.03■□□□□ 0.8
SRRM2-201ENST00000301740 HMGB1P1B2RPK0 211 aaPredicted RBP20.03■□□□□ 0.8
SRRM2-201ENST00000301740 POTEJP0CG39 1038 aa20.03■□□□□ 0.8
SRRM2-201ENST00000301740 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
SRRM2-201ENST00000301740 GOLGA6L9A6NEM1 432 aa20.03■□□□□ 0.8
SRRM2-201ENST00000301740 AMPHP49418 695 aa20.03■□□□□ 0.8
SRRM2-201ENST00000301740 CASQ1P31415 396 aa20.02■□□□□ 0.8
SRRM2-201ENST00000301740 KRT18P05783 430 aaKnown RBP20.02■□□□□ 0.8
SRRM2-201ENST00000301740 USP47Q96K76 1375 aa20.02■□□□□ 0.8
SRRM2-201ENST00000301740 BRPF1P55201 1214 aaPredicted RBP20.02■□□□□ 0.8
SRRM2-201ENST00000301740 IFFO1Q0D2I5 559 aa20.02■□□□□ 0.8
SRRM2-201ENST00000301740 IPO4Q8TEX9 1081 aaKnown RBP20.02■□□□□ 0.8
SRRM2-201ENST00000301740 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
SRRM2-201ENST00000301740 TMCO5BA8MYB1 307 aa20.01■□□□□ 0.79
SRRM2-201ENST00000301740 RAD21O60216 631 aa20.01■□□□□ 0.79
SRRM2-201ENST00000301740 SAFB2Q14151 953 aaKnown RBP eCLIP20.01■□□□□ 0.79
SRRM2-201ENST00000301740 PTPN14Q15678 1187 aa20.01■□□□□ 0.79
SRRM2-201ENST00000301740 PPP1R12BO60237 982 aaPredicted RBP20.01■□□□□ 0.79
SRRM2-201ENST00000301740 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
SRRM2-201ENST00000301740 SREK1Q8WXA9 508 aaKnown RBP20.01■□□□□ 0.79
SRRM2-201ENST00000301740 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
SRRM2-201ENST00000301740 KIF3CO14782 793 aa20■□□□□ 0.79
SRRM2-201ENST00000301740 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
SRRM2-201ENST00000301740 NAA15Q9BXJ9 866 aaKnown RBP19.99■□□□□ 0.79
SRRM2-201ENST00000301740 NSRP1Q9H0G5 558 aaKnown RBP19.99■□□□□ 0.79
SRRM2-201ENST00000301740 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
SRRM2-201ENST00000301740 TRIM22Q8IYM9 498 aa19.99■□□□□ 0.79
SRRM2-201ENST00000301740 GRIPAP1Q4V328 841 aa19.98■□□□□ 0.79
SRRM2-201ENST00000301740 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms