RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 FYB1O15117 783 aa20.17■□□□□ 0.82
GHDC-201ENST00000301671 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
GHDC-201ENST00000301671 XRCC6P12956 609 aaKnown RBP eCLIP20.17■□□□□ 0.82
GHDC-201ENST00000301671 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
GHDC-201ENST00000301671 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
GHDC-201ENST00000301671 RAPGEF3O95398 923 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 IDI1Q13907 227 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 NSD2O96028 1365 aa20.15■□□□□ 0.82
GHDC-201ENST00000301671 USP32Q8NFA0 1604 aa20.14■□□□□ 0.82
GHDC-201ENST00000301671 ADGRB2O60241 1585 aa20.14■□□□□ 0.81
GHDC-201ENST00000301671 GOLGA6L3A6NEY3 463 aa20.14■□□□□ 0.81
GHDC-201ENST00000301671 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
GHDC-201ENST00000301671 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
GHDC-201ENST00000301671 TRAK2O60296 914 aa20.13■□□□□ 0.81
GHDC-201ENST00000301671 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
GHDC-201ENST00000301671 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
GHDC-201ENST00000301671 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
GHDC-201ENST00000301671 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
GHDC-201ENST00000301671 FRMPD1Q5SYB0 1578 aa20.12■□□□□ 0.81
GHDC-201ENST00000301671 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
GHDC-201ENST00000301671 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
GHDC-201ENST00000301671 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
GHDC-201ENST00000301671 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
GHDC-201ENST00000301671 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
GHDC-201ENST00000301671 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
GHDC-201ENST00000301671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.1■□□□□ 0.81
GHDC-201ENST00000301671 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
GHDC-201ENST00000301671 NUCB1Q02818 461 aa20.09■□□□□ 0.81
GHDC-201ENST00000301671 ABCC3O15438 1527 aa20.09■□□□□ 0.81
GHDC-201ENST00000301671 HMOX1P09601 288 aa20.09■□□□□ 0.81
GHDC-201ENST00000301671 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
GHDC-201ENST00000301671 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.81
GHDC-201ENST00000301671 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
GHDC-201ENST00000301671 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
GHDC-201ENST00000301671 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
GHDC-201ENST00000301671 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.81
GHDC-201ENST00000301671 FSD2A1L4K1 749 aa20.08■□□□□ 0.8
GHDC-201ENST00000301671 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.8
GHDC-201ENST00000301671 CHD1LQ86WJ1 897 aa20.08■□□□□ 0.8
GHDC-201ENST00000301671 CABP1Q9NZU7 370 aa20.08■□□□□ 0.8
GHDC-201ENST00000301671 SIGLEC1Q9BZZ2 1709 aa20.07■□□□□ 0.8
GHDC-201ENST00000301671 POGZQ7Z3K3 1410 aa20.07■□□□□ 0.8
GHDC-201ENST00000301671 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
GHDC-201ENST00000301671 NEXMIFQ5QGS0 1516 aa20.06■□□□□ 0.8
GHDC-201ENST00000301671 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
GHDC-201ENST00000301671 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
GHDC-201ENST00000301671 IL16Q14005 1332 aa20.05■□□□□ 0.8
GHDC-201ENST00000301671 CDK19Q9BWU1 502 aa20.04■□□□□ 0.8
GHDC-201ENST00000301671 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
GHDC-201ENST00000301671 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
GHDC-201ENST00000301671 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
GHDC-201ENST00000301671 HECW2Q9P2P5 1572 aa20.03■□□□□ 0.8
GHDC-201ENST00000301671 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
GHDC-201ENST00000301671 RBM25P49756 843 aaKnown RBP20.02■□□□□ 0.8
GHDC-201ENST00000301671 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
GHDC-201ENST00000301671 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.8
GHDC-201ENST00000301671 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
GHDC-201ENST00000301671 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
GHDC-201ENST00000301671 MLH3Q9UHC1 1453 aa20.01■□□□□ 0.79
GHDC-201ENST00000301671 ALDH1L2Q3SY69 923 aa20■□□□□ 0.79
GHDC-201ENST00000301671 KIF2CQ99661 725 aa20■□□□□ 0.79
GHDC-201ENST00000301671 PPIP5K1Q6PFW1 1433 aa20■□□□□ 0.79
GHDC-201ENST00000301671 VAMP4O75379 141 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
GHDC-201ENST00000301671 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 ATAD2Q6PL18 1390 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 FCHSD2O94868 740 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 HSP90AA1P07900 732 aaKnown RBP19.99■□□□□ 0.79
GHDC-201ENST00000301671 DDIT3P35638 169 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 SIRT2Q8IXJ6 389 aa19.99■□□□□ 0.79
GHDC-201ENST00000301671 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
GHDC-201ENST00000301671 BMP2KLQ5H9B9 411 aa19.98■□□□□ 0.79
GHDC-201ENST00000301671 TBC1D9Q6ZT07 1266 aa19.98■□□□□ 0.79
GHDC-201ENST00000301671 MRPL50Q8N5N7 158 aaKnown RBP19.98■□□□□ 0.79
GHDC-201ENST00000301671 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
GHDC-201ENST00000301671 PTPRMP28827 1452 aa19.97■□□□□ 0.79
GHDC-201ENST00000301671 DDX11L8A8MPP1 907 aa19.97■□□□□ 0.79
GHDC-201ENST00000301671 GRPEL1Q9HAV7 217 aa19.97■□□□□ 0.79
GHDC-201ENST00000301671 SNX21Q969T3 373 aa19.97■□□□□ 0.79
GHDC-201ENST00000301671 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
GHDC-201ENST00000301671 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
GHDC-201ENST00000301671 PNPLA6Q8IY17 1366 aa19.96■□□□□ 0.79
GHDC-201ENST00000301671 LRRC7Q96NW7 1537 aa19.96■□□□□ 0.79
GHDC-201ENST00000301671 GAS2L3Q86XJ1 694 aa19.96■□□□□ 0.79
GHDC-201ENST00000301671 PIK3C2BO00750 1634 aa19.96■□□□□ 0.79
GHDC-201ENST00000301671 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
GHDC-201ENST00000301671 MRE11P49959 708 aa19.95■□□□□ 0.78
GHDC-201ENST00000301671 NCOA3Q9Y6Q9 1424 aa19.95■□□□□ 0.78
GHDC-201ENST00000301671 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
GHDC-201ENST00000301671 NFE2L2Q16236 605 aa19.95■□□□□ 0.78
GHDC-201ENST00000301671 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
GHDC-201ENST00000301671 DCTN1Q14203 1278 aa19.94■□□□□ 0.78
GHDC-201ENST00000301671 SLC52A1Q9NWF4 448 aa19.94■□□□□ 0.78
GHDC-201ENST00000301671 C8orf58Q8NAV2 365 aa19.93■□□□□ 0.78
GHDC-201ENST00000301671 NAP1L5Q96NT1 182 aaPredicted RBP19.93■□□□□ 0.78
GHDC-201ENST00000301671 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
GHDC-201ENST00000301671 MYO5BQ9ULV0 1848 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms