RNA–Protein interactions for RNA: ENST00000301305.7

SLC39A4-202, Transcript of solute carrier family 39 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A4, Length 2,174 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-202ENST00000301305 PREX1Q8TCU6 1659 aa28.19■■■□□ 2.1
SLC39A4-202ENST00000301305 ATF7IPQ6VMQ6 1270 aa28.19■■■□□ 2.1
SLC39A4-202ENST00000301305 TRIM35Q9UPQ4 493 aa28.19■■■□□ 2.1
SLC39A4-202ENST00000301305 PNPLA6Q8IY17 1366 aa28.19■■■□□ 2.1
SLC39A4-202ENST00000301305 KIF16BQ96L93 1317 aa28.19■■■□□ 2.1
SLC39A4-202ENST00000301305 SRPK2P78362 688 aaKnown RBP28.18■■■□□ 2.1
SLC39A4-202ENST00000301305 KIF20BQ96Q89 1820 aa28.18■■■□□ 2.1
SLC39A4-202ENST00000301305 IPO8O15397 1037 aaKnown RBP28.18■■■□□ 2.1
SLC39A4-202ENST00000301305 EXOSC9Q06265 439 aaKnown RBP28.18■■■□□ 2.1
SLC39A4-202ENST00000301305 IDI1Q13907 227 aa28.18■■■□□ 2.1
SLC39A4-202ENST00000301305 ZNF428Q96B54 188 aa28.17■■■□□ 2.1
SLC39A4-202ENST00000301305 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
SLC39A4-202ENST00000301305 TRIM27P14373 513 aa28.16■■■□□ 2.1
SLC39A4-202ENST00000301305 MYO5BQ9ULV0 1848 aa28.16■■■□□ 2.1
SLC39A4-202ENST00000301305 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
SLC39A4-202ENST00000301305 ALDH1L2Q3SY69 923 aa28.16■■■□□ 2.1
SLC39A4-202ENST00000301305 YTHDC2Q9H6S0 1430 aaKnown RBP28.15■■■□□ 2.1
SLC39A4-202ENST00000301305 SMC5Q8IY18 1101 aa28.15■■■□□ 2.1
SLC39A4-202ENST00000301305 BRPF3Q9ULD4 1205 aa28.15■■■□□ 2.1
SLC39A4-202ENST00000301305 FYB1O15117 783 aa28.14■■■□□ 2.1
SLC39A4-202ENST00000301305 TBC1D2Q9BYX2 928 aa28.14■■■□□ 2.1
SLC39A4-202ENST00000301305 HDGFL2Q7Z4V5 671 aaPredicted RBP28.14■■■□□ 2.09
SLC39A4-202ENST00000301305 SSH1Q8WYL5 1049 aa28.14■■■□□ 2.09
SLC39A4-202ENST00000301305 TSR2Q969E8 191 aaKnown RBP28.14■■■□□ 2.09
SLC39A4-202ENST00000301305 DIAPH1O60610 1272 aaKnown RBP28.13■■■□□ 2.09
SLC39A4-202ENST00000301305 BRPF1P55201 1214 aaPredicted RBP28.12■■■□□ 2.09
SLC39A4-202ENST00000301305 GGNBP2Q9H3C7 697 aa28.12■■■□□ 2.09
SLC39A4-202ENST00000301305 CHMP4BQ9H444 224 aaKnown RBP28.11■■■□□ 2.09
SLC39A4-202ENST00000301305 PPIP5K1Q6PFW1 1433 aa28.11■■■□□ 2.09
SLC39A4-202ENST00000301305 FCHSD2O94868 740 aa28.1■■■□□ 2.09
SLC39A4-202ENST00000301305 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
SLC39A4-202ENST00000301305 ITPRIPQ8IWB1 547 aa28.1■■■□□ 2.09
SLC39A4-202ENST00000301305 RIPK4P57078 832 aa28.09■■■□□ 2.09
SLC39A4-202ENST00000301305 SLKQ9H2G2 1235 aaPredicted RBP28.09■■■□□ 2.09
SLC39A4-202ENST00000301305 L1TD1Q5T7N2 865 aaKnown RBP28.09■■■□□ 2.09
SLC39A4-202ENST00000301305 C22orf23Q9BZE7 217 aa28.09■■■□□ 2.09
SLC39A4-202ENST00000301305 ZBTB40Q9NUA8 1239 aa28.08■■■□□ 2.09
SLC39A4-202ENST00000301305 ARHGEF40Q8TER5 1519 aa28.08■■■□□ 2.09
SLC39A4-202ENST00000301305 DLC1Q96QB1 1528 aa28.08■■■□□ 2.09
SLC39A4-202ENST00000301305 POGKQ9P215 609 aa28.07■■■□□ 2.08
SLC39A4-202ENST00000301305 NOB1Q9ULX3 412 aaKnown RBP28.07■■■□□ 2.08
SLC39A4-202ENST00000301305 OSCARQ8IYS5 282 aa28.07■■■□□ 2.08
SLC39A4-202ENST00000301305 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
SLC39A4-202ENST00000301305 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
SLC39A4-202ENST00000301305 ATP7BP35670 1465 aa28.06■■■□□ 2.08
SLC39A4-202ENST00000301305 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
SLC39A4-202ENST00000301305 STK26Q9P289 416 aa28.06■■■□□ 2.08
SLC39A4-202ENST00000301305 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SLC39A4-202ENST00000301305 CALD1Q05682 793 aaKnown RBP28.04■■■□□ 2.08
SLC39A4-202ENST00000301305 FAM135BQ49AJ0 1406 aa28.04■■■□□ 2.08
SLC39A4-202ENST00000301305 RTN4Q9NQC3 1192 aaKnown RBP28.04■■■□□ 2.08
SLC39A4-202ENST00000301305 LRRC7Q96NW7 1537 aa28.03■■■□□ 2.08
SLC39A4-202ENST00000301305 TMEM57Q8N5G2 664 aa28.03■■■□□ 2.08
SLC39A4-202ENST00000301305 CHMP5Q9NZZ3 219 aa28.03■■■□□ 2.08
SLC39A4-202ENST00000301305 MINK1Q8N4C8 1332 aaPredicted RBP28.02■■■□□ 2.08
SLC39A4-202ENST00000301305 FAM43AQ8N2R8 423 aa28.01■■■□□ 2.07
SLC39A4-202ENST00000301305 NUCB1Q02818 461 aa28■■■□□ 2.07
SLC39A4-202ENST00000301305 ARHGAP45Q92619 1136 aa28■■■□□ 2.07
SLC39A4-202ENST00000301305 CDK19Q9BWU1 502 aa27.99■■■□□ 2.07
SLC39A4-202ENST00000301305 PIK3R4Q99570 1358 aa27.98■■■□□ 2.07
SLC39A4-202ENST00000301305 REREQ9P2R6 1566 aa27.97■■■□□ 2.07
SLC39A4-202ENST00000301305 RBM25P49756 843 aaKnown RBP27.97■■■□□ 2.07
SLC39A4-202ENST00000301305 MFAP1P55081 439 aaKnown RBP27.97■■■□□ 2.07
SLC39A4-202ENST00000301305 YEATS2Q9ULM3 1422 aa27.97■■■□□ 2.07
SLC39A4-202ENST00000301305 RSPH6AQ9H0K4 717 aa27.96■■■□□ 2.07
SLC39A4-202ENST00000301305 PTCH1Q13635 1447 aa27.95■■■□□ 2.06
SLC39A4-202ENST00000301305 MCM4P33991 863 aa27.95■■■□□ 2.06
SLC39A4-202ENST00000301305 HSCBQ8IWL3 235 aa27.95■■■□□ 2.06
SLC39A4-202ENST00000301305 PPP6R1Q9UPN7 881 aa27.95■■■□□ 2.06
SLC39A4-202ENST00000301305 SNX21Q969T3 373 aa27.94■■■□□ 2.06
SLC39A4-202ENST00000301305 GCC1Q96CN9 775 aa27.94■■■□□ 2.06
SLC39A4-202ENST00000301305 NCOA3Q9Y6Q9 1424 aa27.93■■■□□ 2.06
SLC39A4-202ENST00000301305 NFE2L2Q16236 605 aa27.93■■■□□ 2.06
SLC39A4-202ENST00000301305 CABP1Q9NZU7 370 aa27.93■■■□□ 2.06
SLC39A4-202ENST00000301305 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
SLC39A4-202ENST00000301305 CHD1LQ86WJ1 897 aa27.92■■■□□ 2.06
SLC39A4-202ENST00000301305 BMP2KLQ5H9B9 411 aa27.92■■■□□ 2.06
SLC39A4-202ENST00000301305 PRKAR2BP31323 418 aa27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 GNAI1P63096 354 aa27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 IFT57Q9NWB7 429 aa27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 MAP2P11137 1827 aaKnown RBP27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 CDK12Q9NYV4 1490 aaPredicted RBP27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 POLKQ9UBT6 870 aa27.9■■■□□ 2.06
SLC39A4-202ENST00000301305 SETD1AO15047 1707 aaKnown RBP27.89■■■□□ 2.05
SLC39A4-202ENST00000301305 EDC4Q6P2E9 1401 aaKnown RBP27.88■■■□□ 2.05
SLC39A4-202ENST00000301305 LMOD3Q0VAK6 560 aa27.88■■■□□ 2.05
SLC39A4-202ENST00000301305 AATKQ6ZMQ8 1374 aa27.88■■■□□ 2.05
SLC39A4-202ENST00000301305 DDX11L8A8MPP1 907 aa27.87■■■□□ 2.05
SLC39A4-202ENST00000301305 CIZ1Q9ULV3 898 aaPredicted RBP27.87■■■□□ 2.05
SLC39A4-202ENST00000301305 AGLP35573 1532 aa27.87■■■□□ 2.05
SLC39A4-202ENST00000301305 KIF24Q5T7B8 1368 aa27.86■■■□□ 2.05
SLC39A4-202ENST00000301305 ZBTB7BO15156 539 aaPredicted RBP27.86■■■□□ 2.05
SLC39A4-202ENST00000301305 MRPL50Q8N5N7 158 aaKnown RBP27.86■■■□□ 2.05
SLC39A4-202ENST00000301305 VAMP4O75379 141 aa27.86■■■□□ 2.05
SLC39A4-202ENST00000301305 ISY1Q9ULR0 285 aaKnown RBP27.86■■■□□ 2.05
SLC39A4-202ENST00000301305 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
SLC39A4-202ENST00000301305 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
SLC39A4-202ENST00000301305 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
SLC39A4-202ENST00000301305 CPSF1Q10570 1443 aaKnown RBP27.85■■■□□ 2.05
SLC39A4-202ENST00000301305 FSD2A1L4K1 749 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms