RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 TRPM3Q9HCF6 1732 aaPredicted RBP24.78■■□□□ 1.56
TMED3-201ENST00000299705 XPCQ01831 940 aaPredicted RBP24.77■■□□□ 1.56
TMED3-201ENST00000299705 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
TMED3-201ENST00000299705 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
TMED3-201ENST00000299705 TTC21BQ7Z4L5 1316 aa24.75■■□□□ 1.55
TMED3-201ENST00000299705 TTC21AQ8NDW8 1320 aa24.75■■□□□ 1.55
TMED3-201ENST00000299705 PER1O15534 1290 aaPredicted RBP24.75■■□□□ 1.55
TMED3-201ENST00000299705 NSD3Q9BZ95 1437 aa24.74■■□□□ 1.55
TMED3-201ENST00000299705 COL16A1Q07092 1604 aaPredicted RBP24.73■■□□□ 1.55
TMED3-201ENST00000299705 LRRC59Q96AG4 307 aaKnown RBP24.73■■□□□ 1.55
TMED3-201ENST00000299705 SPATA31A3Q5VYP0 1347 aa24.73■■□□□ 1.55
TMED3-201ENST00000299705 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
TMED3-201ENST00000299705 TNS3Q68CZ2 1445 aa24.72■■□□□ 1.55
TMED3-201ENST00000299705 PAK3O75914 559 aaPredicted RBP24.71■■□□□ 1.55
TMED3-201ENST00000299705 ALS2Q96Q42 1657 aa24.71■■□□□ 1.55
TMED3-201ENST00000299705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.548e-7■■■■□ 23.1
TMED3-201ENST00000299705 CGNL1Q0VF96 1302 aa24.7■■□□□ 1.54
TMED3-201ENST00000299705 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
TMED3-201ENST00000299705 HSPA1LP34931 641 aa24.68■■□□□ 1.54
TMED3-201ENST00000299705 ABTB2Q8N961 1025 aa24.68■■□□□ 1.54
TMED3-201ENST00000299705 PIK3C2AO00443 1686 aa24.67■■□□□ 1.54
TMED3-201ENST00000299705 FYB1O15117 783 aa24.66■■□□□ 1.54
TMED3-201ENST00000299705 USP31Q70CQ4 1352 aa24.66■■□□□ 1.54
TMED3-201ENST00000299705 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
TMED3-201ENST00000299705 NME9Q86XW9 330 aa24.65■■□□□ 1.54
TMED3-201ENST00000299705 NSD2O96028 1365 aa24.65■■□□□ 1.54
TMED3-201ENST00000299705 NPC1L1Q9UHC9 1359 aa24.65■■□□□ 1.54
TMED3-201ENST00000299705 KIF20BQ96Q89 1820 aa24.65■■□□□ 1.54
TMED3-201ENST00000299705 LMOD2Q6P5Q4 547 aa24.64■■□□□ 1.54
TMED3-201ENST00000299705 USP54Q70EL1 1684 aa24.63■■□□□ 1.53
TMED3-201ENST00000299705 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
TMED3-201ENST00000299705 NLRP6P59044 892 aa24.62■■□□□ 1.53
TMED3-201ENST00000299705 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
TMED3-201ENST00000299705 JCADQ9P266 1359 aa24.61■■□□□ 1.53
TMED3-201ENST00000299705 COL22A1Q8NFW1 1626 aaPredicted RBP24.61■■□□□ 1.53
TMED3-201ENST00000299705 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
TMED3-201ENST00000299705 OVOS2A0A0J9YW53 1432 aa24.6■■□□□ 1.53
TMED3-201ENST00000299705 OVOS2Q6IE36 1432 aa24.6■■□□□ 1.53
TMED3-201ENST00000299705 GGNBP2Q9H3C7 697 aa24.6■■□□□ 1.53
TMED3-201ENST00000299705 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
TMED3-201ENST00000299705 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
TMED3-201ENST00000299705 COG3Q96JB2 828 aa24.59■■□□□ 1.53
TMED3-201ENST00000299705 ZRANB1Q9UGI0 708 aa24.59■■□□□ 1.53
TMED3-201ENST00000299705 USP19O94966 1318 aa24.59■■□□□ 1.53
TMED3-201ENST00000299705 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.53
TMED3-201ENST00000299705 MARF1Q9Y4F3 1742 aaKnown RBP24.58■■□□□ 1.53
TMED3-201ENST00000299705 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
TMED3-201ENST00000299705 SLIT3O75094 1523 aa24.55■■□□□ 1.52
TMED3-201ENST00000299705 CC2D1BQ5T0F9 858 aaKnown RBP24.54■■□□□ 1.52
TMED3-201ENST00000299705 KCNH5Q8NCM2 988 aa24.52■■□□□ 1.52
TMED3-201ENST00000299705 PHRF1Q9P1Y6 1649 aaKnown RBP24.52■■□□□ 1.52
TMED3-201ENST00000299705 GCP02774 474 aa24.51■■□□□ 1.51
TMED3-201ENST00000299705 MORC1Q86VD1 984 aa24.51■■□□□ 1.51
TMED3-201ENST00000299705 SPATA31A6Q5VVP1 1343 aa24.51■■□□□ 1.51
TMED3-201ENST00000299705 ABCA3Q99758 1704 aa24.51■■□□□ 1.51
TMED3-201ENST00000299705 CABLES1Q8TDN4 633 aa24.51■■□□□ 1.51
TMED3-201ENST00000299705 NFAT5O94916 1531 aa24.48■■□□□ 1.51
TMED3-201ENST00000299705 AATKQ6ZMQ8 1374 aa24.47■■□□□ 1.51
TMED3-201ENST00000299705 PARD3Q8TEW0 1356 aa24.46■■□□□ 1.51
TMED3-201ENST00000299705 PLEKHG5O94827 1062 aa24.46■■□□□ 1.51
TMED3-201ENST00000299705 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
TMED3-201ENST00000299705 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.51
TMED3-201ENST00000299705 RALBP1Q15311 655 aa24.45■■□□□ 1.51
TMED3-201ENST00000299705 CPDO75976 1380 aa24.44■■□□□ 1.5
TMED3-201ENST00000299705 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
TMED3-201ENST00000299705 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
TMED3-201ENST00000299705 SOX12O15370 315 aa24.42■■□□□ 1.5
TMED3-201ENST00000299705 TNNT2P45379 298 aaPredicted RBP24.42■■□□□ 1.5
TMED3-201ENST00000299705 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
TMED3-201ENST00000299705 NUTM2BA6NNL0 878 aaPredicted RBP24.41■■□□□ 1.5
TMED3-201ENST00000299705 NUTM2EB1AL46 878 aaPredicted RBP24.41■■□□□ 1.5
TMED3-201ENST00000299705 ANP32CO43423 234 aa24.41■■□□□ 1.5
TMED3-201ENST00000299705 NUTM2AQ8IVF1 878 aaPredicted RBP24.41■■□□□ 1.5
TMED3-201ENST00000299705 FBLN1P23142 703 aa24.4■■□□□ 1.5
TMED3-201ENST00000299705 ZC3H6P61129 1189 aaKnown RBP24.4■■□□□ 1.5
TMED3-201ENST00000299705 KIAA0232Q92628 1395 aa24.39■■□□□ 1.5
TMED3-201ENST00000299705 MAP2P11137 1827 aaKnown RBP24.39■■□□□ 1.49
TMED3-201ENST00000299705 POLKQ9UBT6 870 aa24.38■■□□□ 1.49
TMED3-201ENST00000299705 KIF24Q5T7B8 1368 aa24.38■■□□□ 1.49
TMED3-201ENST00000299705 LRP6O75581 1613 aa24.38■■□□□ 1.49
TMED3-201ENST00000299705 MAP3K19Q56UN5 1328 aa24.38■■□□□ 1.49
TMED3-201ENST00000299705 RRS1Q15050 365 aaKnown RBP24.38■■□□□ 1.49
TMED3-201ENST00000299705 LTN1O94822 1766 aa24.37■■□□□ 1.49
TMED3-201ENST00000299705 SMG6Q86US8 1419 aaKnown RBP24.36■■□□□ 1.49
TMED3-201ENST00000299705 ABCC6O95255 1503 aa24.36■■□□□ 1.49
TMED3-201ENST00000299705 ADAMTS2O95450 1211 aa24.36■■□□□ 1.49
TMED3-201ENST00000299705 PPP2R1AP30153 589 aa24.36■■□□□ 1.49
TMED3-201ENST00000299705 PRDM11Q9NQV5 511 aa24.36■■□□□ 1.49
TMED3-201ENST00000299705 RTL1A6NKG5 1358 aa24.35■■□□□ 1.49
TMED3-201ENST00000299705 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
TMED3-201ENST00000299705 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
TMED3-201ENST00000299705 FAM83GA6ND36 823 aa24.34■■□□□ 1.49
TMED3-201ENST00000299705 COL14A1Q05707 1796 aaKnown RBP24.33■■□□□ 1.49
TMED3-201ENST00000299705 AMPHP49418 695 aa24.33■■□□□ 1.49
TMED3-201ENST00000299705 MTHFSP49914 203 aa24.33■■□□□ 1.49
TMED3-201ENST00000299705 IP6K1Q92551 441 aa24.33■■□□□ 1.49
TMED3-201ENST00000299705 COL18A1P39060 1754 aa24.33■■□□□ 1.48
TMED3-201ENST00000299705 FLT4P35916 1363 aa24.32■■□□□ 1.48
TMED3-201ENST00000299705 CHRNA2Q15822 529 aa24.32■■□□□ 1.48
TMED3-201ENST00000299705 PEAK1Q9H792 1746 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms