RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 AKNAQ7Z591 1439 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 ACSBG1Q96GR2 724 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 PLEKHH2Q8IVE3 1493 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
RAG1-201ENST00000299440 CCDC57Q2TAC2 916 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 FGD6Q6ZV73 1430 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
RAG1-201ENST00000299440 POLD1P28340 1107 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 ERC2O15083 957 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 CCDC47Q96A33 483 aaKnown RBP8.67□□□□□ -1.02
RAG1-201ENST00000299440 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 IGHMBP2P38935 993 aaKnown RBP8.67□□□□□ -1.02
RAG1-201ENST00000299440 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 TPM2P07951 284 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 CCDC158Q5M9N0 1113 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 CFTRP13569 1480 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 ROCK1Q13464 1354 aa8.67□□□□□ -1.02
RAG1-201ENST00000299440 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 LRPPRCP42704 1394 aaKnown RBP8.66□□□□□ -1.02
RAG1-201ENST00000299440 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 GZF1Q9H116 711 aaPredicted RBP8.66□□□□□ -1.02
RAG1-201ENST00000299440 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
RAG1-201ENST00000299440 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
RAG1-201ENST00000299440 RNF20Q5VTR2 975 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 CUX1P39880 1505 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 RFC4P35249 363 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 RAI14Q9P0K7 980 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 ADGRL1O94910 1474 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 SPDYE4A6NLX3 237 aa8.66□□□□□ -1.02
RAG1-201ENST00000299440 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
RAG1-201ENST00000299440 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.02
RAG1-201ENST00000299440 NBPF1Q3BBV0 1214 aa8.65□□□□□ -1.02
RAG1-201ENST00000299440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
RAG1-201ENST00000299440 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
RAG1-201ENST00000299440 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.03
RAG1-201ENST00000299440 DDX19BQ9UMR2 479 aa8.65□□□□□ -1.03
RAG1-201ENST00000299440 SART3Q15020 963 aaKnown RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 SYAP1Q96A49 352 aaPredicted RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 CCDC61Q9Y6R9 512 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 TPM3P06753 285 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 PNISRQ8TF01 805 aaKnown RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 ATP2B1P20020 1258 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 ABCF2Q9UG63 623 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 EPRSP07814 1512 aaKnown RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
RAG1-201ENST00000299440 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
RAG1-201ENST00000299440 SLC4A2P04920 1241 aa8.63□□□□□ -1.03
RAG1-201ENST00000299440 TFCP2L1Q9NZI6 479 aa8.63□□□□□ -1.03
RAG1-201ENST00000299440 FKBP4Q02790 459 aaKnown RBP eCLIP8.63□□□□□ -1.03
RAG1-201ENST00000299440 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
RAG1-201ENST00000299440 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
RAG1-201ENST00000299440 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
RAG1-201ENST00000299440 CASKIN1Q8WXD9 1431 aa8.62□□□□□ -1.03
RAG1-201ENST00000299440 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
RAG1-201ENST00000299440 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.62□□□□□ -1.03
RAG1-201ENST00000299440 ARHGEF11O15085 1522 aa8.62□□□□□ -1.03
RAG1-201ENST00000299440 GPTP24298 496 aa8.62□□□□□ -1.03
RAG1-201ENST00000299440 ZFYVE27Q5T4F4 411 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 XBP1P17861 261 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
RAG1-201ENST00000299440 RPGRIP1LQ68CZ1 1315 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 GNAI3P08754 354 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 MIS18AQ9NYP9 233 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 TCP11L2Q8N4U5 519 aa8.61□□□□□ -1.03
RAG1-201ENST00000299440 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 TRMT112Q9UI30 125 aaKnown RBP8.6□□□□□ -1.03
RAG1-201ENST00000299440 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
RAG1-201ENST00000299440 ODF2Q5BJF6 829 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
RAG1-201ENST00000299440 TNRQ92752 1358 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 KRT18P05783 430 aaKnown RBP8.6□□□□□ -1.03
RAG1-201ENST00000299440 IDI1Q13907 227 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 NACAP1Q9BZK3 213 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
RAG1-201ENST00000299440 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 REC8O95072 547 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 ST5P78524 1137 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
RAG1-201ENST00000299440 DDB1Q16531 1140 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 USP5P45974 858 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 CRBNQ96SW2 442 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 CAVIN4Q5BKX8 364 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 KIAA0586Q9BVV6 1533 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 IDH1O75874 414 aaKnown RBP8.59□□□□□ -1.03
RAG1-201ENST00000299440 EPS15P42566 896 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 TDO2P48775 406 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms