RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
CDH8-201ENST00000299345 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
CDH8-201ENST00000299345 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
CDH8-201ENST00000299345 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
CDH8-201ENST00000299345 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
CDH8-201ENST00000299345 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
CDH8-201ENST00000299345 FCHSD2O94868 740 aa17.33■□□□□ 0.37
CDH8-201ENST00000299345 HMOX1P09601 288 aa17.33■□□□□ 0.37
CDH8-201ENST00000299345 FBLN1P23142 703 aa17.33■□□□□ 0.37
CDH8-201ENST00000299345 PCDHB15Q9Y5E8 787 aa17.33■□□□□ 0.37
CDH8-201ENST00000299345 RICTORQ6R327 1708 aa17.33■□□□□ 0.37
CDH8-201ENST00000299345 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
CDH8-201ENST00000299345 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
CDH8-201ENST00000299345 PTPRMP28827 1452 aa17.32■□□□□ 0.36
CDH8-201ENST00000299345 SSH1Q8WYL5 1049 aa17.32■□□□□ 0.36
CDH8-201ENST00000299345 COG3Q96JB2 828 aa17.32■□□□□ 0.36
CDH8-201ENST00000299345 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 WASLO00401 505 aaPredicted RBP17.31■□□□□ 0.36
CDH8-201ENST00000299345 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
CDH8-201ENST00000299345 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
CDH8-201ENST00000299345 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
CDH8-201ENST00000299345 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
CDH8-201ENST00000299345 BECN1Q14457 450 aa17.3■□□□□ 0.36
CDH8-201ENST00000299345 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
CDH8-201ENST00000299345 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
CDH8-201ENST00000299345 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
CDH8-201ENST00000299345 NOB1Q9ULX3 412 aaKnown RBP17.29■□□□□ 0.36
CDH8-201ENST00000299345 IL16Q14005 1332 aa17.29■□□□□ 0.36
CDH8-201ENST00000299345 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
CDH8-201ENST00000299345 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
CDH8-201ENST00000299345 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 NME9Q86XW9 330 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 TRIM27P14373 513 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
CDH8-201ENST00000299345 NUTM2FA1L443 756 aa17.27■□□□□ 0.35
CDH8-201ENST00000299345 SHPRHQ149N8 1683 aa17.27■□□□□ 0.35
CDH8-201ENST00000299345 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
CDH8-201ENST00000299345 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
CDH8-201ENST00000299345 A2ML1A8K2U0 1454 aa17.25■□□□□ 0.35
CDH8-201ENST00000299345 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
CDH8-201ENST00000299345 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
CDH8-201ENST00000299345 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
CDH8-201ENST00000299345 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
CDH8-201ENST00000299345 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
CDH8-201ENST00000299345 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
CDH8-201ENST00000299345 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 GNAI1P63096 354 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 MED14O60244 1454 aa17.23■□□□□ 0.35
CDH8-201ENST00000299345 SOX12O15370 315 aa17.22■□□□□ 0.35
CDH8-201ENST00000299345 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
CDH8-201ENST00000299345 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
CDH8-201ENST00000299345 MYO5BQ9ULV0 1848 aa17.22■□□□□ 0.35
CDH8-201ENST00000299345 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
CDH8-201ENST00000299345 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
CDH8-201ENST00000299345 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
CDH8-201ENST00000299345 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
CDH8-201ENST00000299345 METP08581 1390 aa17.21■□□□□ 0.34
CDH8-201ENST00000299345 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
CDH8-201ENST00000299345 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
CDH8-201ENST00000299345 TNRQ92752 1358 aa17.2■□□□□ 0.34
CDH8-201ENST00000299345 AGLP35573 1532 aa17.2■□□□□ 0.34
CDH8-201ENST00000299345 SEC24BO95487 1268 aa17.19■□□□□ 0.34
CDH8-201ENST00000299345 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
CDH8-201ENST00000299345 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
CDH8-201ENST00000299345 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
CDH8-201ENST00000299345 ATP7BP35670 1465 aa17.19■□□□□ 0.34
CDH8-201ENST00000299345 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
CDH8-201ENST00000299345 CLTCQ00610 1675 aaKnown RBP17.17■□□□□ 0.34
CDH8-201ENST00000299345 SLKQ9H2G2 1235 aaPredicted RBP17.17■□□□□ 0.34
CDH8-201ENST00000299345 IL13P35225 146 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
CDH8-201ENST00000299345 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
CDH8-201ENST00000299345 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
CDH8-201ENST00000299345 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
CDH8-201ENST00000299345 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
CDH8-201ENST00000299345 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
CDH8-201ENST00000299345 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
CDH8-201ENST00000299345 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
CDH8-201ENST00000299345 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
CDH8-201ENST00000299345 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
CDH8-201ENST00000299345 ZBTB40Q9NUA8 1239 aa17.13■□□□□ 0.33
CDH8-201ENST00000299345 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
CDH8-201ENST00000299345 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
CDH8-201ENST00000299345 VAMP4O75379 141 aa17.12■□□□□ 0.33
CDH8-201ENST00000299345 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
CDH8-201ENST00000299345 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms