RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 RALYLQ86SE5 291 aaKnown RBP6.65□□□□□ -1.35
CPSF2-201ENST00000298875 KIF7Q2M1P5 1343 aa6.65□□□□□ -1.35
CPSF2-201ENST00000298875 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.35
CPSF2-201ENST00000298875 FGD5Q6ZNL6 1462 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 KIAA0754O94854 1291 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 XBP1P17861 261 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 MRE11P49959 708 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 SMARCE1Q969G3 411 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 NEUROD6Q96NK8 337 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 MTMR7Q9Y216 660 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 MINK1Q8N4C8 1332 aaPredicted RBP6.64□□□□□ -1.35
CPSF2-201ENST00000298875 CUL7Q14999 1698 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 PANK1Q8TE04 598 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 ERICH3Q5RHP9 1530 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 KINO60870 393 aaKnown RBP6.64□□□□□ -1.35
CPSF2-201ENST00000298875 CDC45O75419 566 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 CDK5RAP3Q96JB5 506 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 SDF4Q9BRK5 362 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 MAGEC2Q9UBF1 373 aaPredicted RBP6.64□□□□□ -1.35
CPSF2-201ENST00000298875 WASHC4Q2M389 1173 aa6.64□□□□□ -1.35
CPSF2-201ENST00000298875 ERLIN1O75477 346 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
CPSF2-201ENST00000298875 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.63□□□□□ -1.35
CPSF2-201ENST00000298875 CUX1P39880 1505 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 PLB1Q6P1J6 1458 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 SYCP1Q15431 976 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 CALCOCO1Q9P1Z2 691 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 GOLGA6L10A6NI86 522 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 TRAK2O60296 914 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 DHX57Q6P158 1386 aaKnown RBP6.63□□□□□ -1.35
CPSF2-201ENST00000298875 CTR9Q6PD62 1173 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
CPSF2-201ENST00000298875 SSR1P43307 286 aaKnown RBP6.63□□□□□ -1.35
CPSF2-201ENST00000298875 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 IKQ13123 557 aaPredicted RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 DNAJC2Q99543 621 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 FILIP1LQ4L180 1135 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 API5Q9BZZ5 524 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 TOPBP1Q92547 1522 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 TMEM132AQ24JP5 1023 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 RBM28Q9NW13 759 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 CT47B1P0C2W7 299 aaPredicted RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 IQCEQ6IPM2 695 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 CNTROBQ8N137 903 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 KRT18P05783 430 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 CEBPZQ03701 1054 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 RBM33Q96EV2 1170 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 PRPF40AO75400 957 aaKnown RBP6.62□□□□□ -1.35
CPSF2-201ENST00000298875 ERLIN2O94905 339 aa6.62□□□□□ -1.35
CPSF2-201ENST00000298875 TSPYL4Q9UJ04 414 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 HSP90AB4PQ58FF6 505 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 CNTLNQ9NXG0 1405 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 AIMP1Q12904 312 aaKnown RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 HMGB1P1B2RPK0 211 aaPredicted RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 EIF3JO75822 258 aaKnown RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 HMOX1P09601 288 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 MEX3CQ5U5Q3 659 aaKnown RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 MIA2Q96PC5 1412 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 SEPT7Q16181 437 aaKnown RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 CCDC181Q5TID7 509 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 CCAR1Q8IX12 1150 aaKnown RBP6.61□□□□□ -1.35
CPSF2-201ENST00000298875 FSD1Q9BTV5 496 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 BRPF3Q9ULD4 1205 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 KIAA0586Q9BVV6 1533 aa6.61□□□□□ -1.35
CPSF2-201ENST00000298875 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 TXLNAP40222 546 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 HOMEZQ8IX15 550 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 DYDC1Q8WWB3 177 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-201ENST00000298875 CENPHQ9H3R5 247 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 FAM193AP78312 1265 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 WASHC2AQ641Q2 1341 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 SERPINC1P01008 464 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 ZNF396Q96N95 335 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-201ENST00000298875 RIC3Q7Z5B4 369 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 FAM177A1Q8N128 213 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-201ENST00000298875 IL27Q8NEV9 243 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 RABEP1Q15276 862 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
CPSF2-201ENST00000298875 MBD3O95983 291 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 PDIA4P13667 645 aaKnown RBP6.6□□□□□ -1.35
CPSF2-201ENST00000298875 MCM5P33992 734 aa6.6□□□□□ -1.35
CPSF2-201ENST00000298875 UQCRHLA0A096LP55 91 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 UQCRHP07919 91 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 TAX1BP1Q86VP1 789 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 GNAI1P63096 354 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 PSME1Q06323 249 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 SART3Q15020 963 aaKnown RBP6.59□□□□□ -1.35
CPSF2-201ENST00000298875 KLHL34Q8N239 644 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 ZNHIT6Q9NWK9 470 aaKnown RBP6.59□□□□□ -1.35
CPSF2-201ENST00000298875 UNC13AQ9UPW8 1703 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 STK38Q15208 465 aa6.59□□□□□ -1.35
CPSF2-201ENST00000298875 ERICH4A6NGS2 130 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 SPATA24Q86W54 205 aa6.58□□□□□ -1.36
CPSF2-201ENST00000298875 FIBPO43427 364 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms