RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 EXOSC9Q06265 439 aaKnown RBP21.29■■□□□ 1
RPN1-201ENST00000296255 ZMYM3Q14202 1370 aa21.29■■□□□ 1
RPN1-201ENST00000296255 PRAM1Q96QH2 718 aa21.28■■□□□ 1
RPN1-201ENST00000296255 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
RPN1-201ENST00000296255 DZIP1LQ8IYY4 767 aaKnown RBP21.28■■□□□ 1
RPN1-201ENST00000296255 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
RPN1-201ENST00000296255 ATAD2Q6PL18 1390 aa21.27■□□□□ 0.99
RPN1-201ENST00000296255 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■□□□□ 0.99
RPN1-201ENST00000296255 MED14O60244 1454 aa21.26■□□□□ 0.99
RPN1-201ENST00000296255 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
RPN1-201ENST00000296255 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
RPN1-201ENST00000296255 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
RPN1-201ENST00000296255 SSH1Q8WYL5 1049 aa21.24■□□□□ 0.99
RPN1-201ENST00000296255 TRIM27P14373 513 aa21.24■□□□□ 0.99
RPN1-201ENST00000296255 POGKQ9P215 609 aa21.23■□□□□ 0.99
RPN1-201ENST00000296255 FBXO31Q5XUX0 539 aaPredicted RBP21.22■□□□□ 0.99
RPN1-201ENST00000296255 TBC1D32Q96NH3 1257 aa21.22■□□□□ 0.99
RPN1-201ENST00000296255 IL16Q14005 1332 aa21.21■□□□□ 0.99
RPN1-201ENST00000296255 PNPLA6Q8IY17 1366 aa21.21■□□□□ 0.99
RPN1-201ENST00000296255 ALKQ9UM73 1620 aa21.21■□□□□ 0.99
RPN1-201ENST00000296255 RIPK4P57078 832 aa21.21■□□□□ 0.99
RPN1-201ENST00000296255 BECN1Q14457 450 aa21.21■□□□□ 0.99
RPN1-201ENST00000296255 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
RPN1-201ENST00000296255 ARHGEF40Q8TER5 1519 aa21.2■□□□□ 0.98
RPN1-201ENST00000296255 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
RPN1-201ENST00000296255 ATF7IPQ6VMQ6 1270 aa21.2■□□□□ 0.98
RPN1-201ENST00000296255 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
RPN1-201ENST00000296255 CABP1Q9NZU7 370 aa21.18■□□□□ 0.98
RPN1-201ENST00000296255 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
RPN1-201ENST00000296255 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
RPN1-201ENST00000296255 HDGFL2Q7Z4V5 671 aaPredicted RBP21.17■□□□□ 0.98
RPN1-201ENST00000296255 ITPRIPQ8IWB1 547 aa21.17■□□□□ 0.98
RPN1-201ENST00000296255 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
RPN1-201ENST00000296255 BRPF3Q9ULD4 1205 aa21.17■□□□□ 0.98
RPN1-201ENST00000296255 DDX19BQ9UMR2 479 aa21.17■□□□□ 0.98
RPN1-201ENST00000296255 SLKQ9H2G2 1235 aaPredicted RBP21.16■□□□□ 0.98
RPN1-201ENST00000296255 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
RPN1-201ENST00000296255 TMEM57Q8N5G2 664 aa21.15■□□□□ 0.98
RPN1-201ENST00000296255 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
RPN1-201ENST00000296255 CDC42BPGQ6DT37 1551 aa21.14■□□□□ 0.98
RPN1-201ENST00000296255 FBLN1P23142 703 aa21.14■□□□□ 0.97
RPN1-201ENST00000296255 TBC1D2Q9BYX2 928 aa21.14■□□□□ 0.97
RPN1-201ENST00000296255 RTN4Q9NQC3 1192 aaKnown RBP21.14■□□□□ 0.97
RPN1-201ENST00000296255 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
RPN1-201ENST00000296255 FCHSD2O94868 740 aa21.12■□□□□ 0.97
RPN1-201ENST00000296255 SMC5Q8IY18 1101 aa21.12■□□□□ 0.97
RPN1-201ENST00000296255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.11■□□□□ 0.97
RPN1-201ENST00000296255 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
RPN1-201ENST00000296255 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
RPN1-201ENST00000296255 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
RPN1-201ENST00000296255 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
RPN1-201ENST00000296255 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
RPN1-201ENST00000296255 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
RPN1-201ENST00000296255 KIF16BQ96L93 1317 aa21.09■□□□□ 0.97
RPN1-201ENST00000296255 ALDH1L2Q3SY69 923 aa21.08■□□□□ 0.97
RPN1-201ENST00000296255 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.97
RPN1-201ENST00000296255 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
RPN1-201ENST00000296255 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
RPN1-201ENST00000296255 ATP7BP35670 1465 aa21.07■□□□□ 0.96
RPN1-201ENST00000296255 PHACTR3Q96KR7 559 aa21.07■□□□□ 0.96
RPN1-201ENST00000296255 SETD1AO15047 1707 aaKnown RBP21.07■□□□□ 0.96
RPN1-201ENST00000296255 C22orf23Q9BZE7 217 aa21.06■□□□□ 0.96
RPN1-201ENST00000296255 MAP2P11137 1827 aaKnown RBP21.06■□□□□ 0.96
RPN1-201ENST00000296255 MFAP1P55081 439 aaKnown RBP21.05■□□□□ 0.96
RPN1-201ENST00000296255 A2ML1A8K2U0 1454 aa21.05■□□□□ 0.96
RPN1-201ENST00000296255 RIMBP3CA6NJZ7 1639 aa21.05■□□□□ 0.96
RPN1-201ENST00000296255 RIMBP3BA6NNM3 1639 aa21.05■□□□□ 0.96
RPN1-201ENST00000296255 RIMBP3Q9UFD9 1639 aa21.05■□□□□ 0.96
RPN1-201ENST00000296255 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
RPN1-201ENST00000296255 HMOX1P09601 288 aa21.04■□□□□ 0.96
RPN1-201ENST00000296255 THUMPD2Q9BTF0 503 aaKnown RBP21.04■□□□□ 0.96
RPN1-201ENST00000296255 NUCB1Q02818 461 aa21.04■□□□□ 0.96
RPN1-201ENST00000296255 BRPF1P55201 1214 aaPredicted RBP21.03■□□□□ 0.96
RPN1-201ENST00000296255 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
RPN1-201ENST00000296255 EMILIN1Q9Y6C2 1016 aa21.02■□□□□ 0.96
RPN1-201ENST00000296255 RIMS2Q9UQ26 1411 aa21.02■□□□□ 0.95
RPN1-201ENST00000296255 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
RPN1-201ENST00000296255 VAMP4O75379 141 aa21.01■□□□□ 0.95
RPN1-201ENST00000296255 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
RPN1-201ENST00000296255 IL13P35225 146 aa21■□□□□ 0.95
RPN1-201ENST00000296255 MRPL50Q8N5N7 158 aaKnown RBP21■□□□□ 0.95
RPN1-201ENST00000296255 TSPYL6Q8N831 410 aa21■□□□□ 0.95
RPN1-201ENST00000296255 ZNF428Q96B54 188 aa21■□□□□ 0.95
RPN1-201ENST00000296255 ZRANB1Q9UGI0 708 aa21■□□□□ 0.95
RPN1-201ENST00000296255 NME9Q86XW9 330 aa20.99■□□□□ 0.95
RPN1-201ENST00000296255 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
RPN1-201ENST00000296255 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
RPN1-201ENST00000296255 ZBTB7BO15156 539 aaPredicted RBP20.98■□□□□ 0.95
RPN1-201ENST00000296255 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
RPN1-201ENST00000296255 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
RPN1-201ENST00000296255 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 AGLP35573 1532 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 ZNF853P0CG23 659 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 PTCH1Q13635 1447 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 PIK3R4Q99570 1358 aa20.97■□□□□ 0.95
RPN1-201ENST00000296255 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
RPN1-201ENST00000296255 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
RPN1-201ENST00000296255 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
RPN1-201ENST00000296255 IFT57Q9NWB7 429 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms