RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 DRC7Q8IY82 874 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
SPICE1-201ENST00000295872 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 TOM1O60784 492 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
SPICE1-201ENST00000295872 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
SPICE1-201ENST00000295872 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
SPICE1-201ENST00000295872 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
SPICE1-201ENST00000295872 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPICE1-201ENST00000295872 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 MSH6P52701 1360 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
SPICE1-201ENST00000295872 UBAP1LF5GYI3 381 aa16.19■□□□□ 0.18
SPICE1-201ENST00000295872 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
SPICE1-201ENST00000295872 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
SPICE1-201ENST00000295872 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
SPICE1-201ENST00000295872 CCDC34Q96HJ3 373 aa16.18■□□□□ 0.18
SPICE1-201ENST00000295872 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
SPICE1-201ENST00000295872 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
SPICE1-201ENST00000295872 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
SPICE1-201ENST00000295872 HSPA2P54652 639 aa16.17■□□□□ 0.18
SPICE1-201ENST00000295872 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
SPICE1-201ENST00000295872 TWISTNBQ3B726 338 aaPredicted RBP16.16■□□□□ 0.18
SPICE1-201ENST00000295872 LNPKQ9C0E8 428 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 PHF14O94880 888 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
SPICE1-201ENST00000295872 GNAI3P08754 354 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 DISP1Q96F81 1524 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 ATP6V1DQ9Y5K8 247 aa16.16■□□□□ 0.18
SPICE1-201ENST00000295872 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
SPICE1-201ENST00000295872 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
SPICE1-201ENST00000295872 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
SPICE1-201ENST00000295872 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
SPICE1-201ENST00000295872 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
SPICE1-201ENST00000295872 SCAF11Q99590 1463 aaKnown RBP16.14■□□□□ 0.18
SPICE1-201ENST00000295872 ERC2O15083 957 aa16.14■□□□□ 0.17
SPICE1-201ENST00000295872 FCHSD2O94868 740 aa16.14■□□□□ 0.17
SPICE1-201ENST00000295872 TPM4P67936 248 aa16.14■□□□□ 0.17
SPICE1-201ENST00000295872 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
SPICE1-201ENST00000295872 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
SPICE1-201ENST00000295872 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
SPICE1-201ENST00000295872 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
SPICE1-201ENST00000295872 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 C11orf95C9JLR9 678 aaPredicted RBP16.13■□□□□ 0.17
SPICE1-201ENST00000295872 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 SLC4A3P48751 1232 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 NME9Q86XW9 330 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
SPICE1-201ENST00000295872 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
SPICE1-201ENST00000295872 CDC45O75419 566 aa16.12■□□□□ 0.17
SPICE1-201ENST00000295872 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
SPICE1-201ENST00000295872 TSR2Q969E8 191 aaKnown RBP16.11■□□□□ 0.17
SPICE1-201ENST00000295872 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
SPICE1-201ENST00000295872 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
SPICE1-201ENST00000295872 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 H3BQV1 296 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
SPICE1-201ENST00000295872 NOB1Q9ULX3 412 aaKnown RBP16.1■□□□□ 0.17
SPICE1-201ENST00000295872 BCAR3O75815 825 aa16.09■□□□□ 0.17
SPICE1-201ENST00000295872 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
SPICE1-201ENST00000295872 ATP10AO60312 1499 aa16.09■□□□□ 0.17
SPICE1-201ENST00000295872 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
SPICE1-201ENST00000295872 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
SPICE1-201ENST00000295872 CLSTN1O94985 981 aa16.08■□□□□ 0.17
SPICE1-201ENST00000295872 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
SPICE1-201ENST00000295872 BTBD11A6QL63 1104 aa16.08■□□□□ 0.16
SPICE1-201ENST00000295872 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
SPICE1-201ENST00000295872 SF3A1Q15459 793 aaKnown RBP16.07■□□□□ 0.16
SPICE1-201ENST00000295872 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
SPICE1-201ENST00000295872 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
SPICE1-201ENST00000295872 FOXD4L5Q5VV16 416 aaPredicted RBP16.07■□□□□ 0.16
SPICE1-201ENST00000295872 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
SPICE1-201ENST00000295872 FOXD4L4Q8WXT5 416 aaPredicted RBP16.07■□□□□ 0.16
SPICE1-201ENST00000295872 APPP05067 770 aa16.07■□□□□ 0.16
SPICE1-201ENST00000295872 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
SPICE1-201ENST00000295872 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
SPICE1-201ENST00000295872 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
SPICE1-201ENST00000295872 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
SPICE1-201ENST00000295872 ACEP12821 1306 aa16.06■□□□□ 0.16
SPICE1-201ENST00000295872 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
SPICE1-201ENST00000295872 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
SPICE1-201ENST00000295872 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
SPICE1-201ENST00000295872 NSD2O96028 1365 aa16.06■□□□□ 0.16
SPICE1-201ENST00000295872 GNAI2P04899 355 aa16.05■□□□□ 0.16
SPICE1-201ENST00000295872 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
SPICE1-201ENST00000295872 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
SPICE1-201ENST00000295872 MVPQ14764 893 aaKnown RBP16.05■□□□□ 0.16
SPICE1-201ENST00000295872 EXOC5O00471 708 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms