RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
CNOT9-202ENST00000295701 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
CNOT9-202ENST00000295701 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
CNOT9-202ENST00000295701 TECPR2O15040 1411 aa13.86□□□□□ -0.19
CNOT9-202ENST00000295701 EP400Q96L91 3159 aa13.85□□□□□ -0.19
CNOT9-202ENST00000295701 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
CNOT9-202ENST00000295701 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
CNOT9-202ENST00000295701 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
CNOT9-202ENST00000295701 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
CNOT9-202ENST00000295701 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
CNOT9-202ENST00000295701 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.19
CNOT9-202ENST00000295701 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.19
CNOT9-202ENST00000295701 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
CNOT9-202ENST00000295701 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
CNOT9-202ENST00000295701 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.2
CNOT9-202ENST00000295701 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
CNOT9-202ENST00000295701 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
CNOT9-202ENST00000295701 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
CNOT9-202ENST00000295701 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
CNOT9-202ENST00000295701 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
CNOT9-202ENST00000295701 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
CNOT9-202ENST00000295701 BRWD3Q6RI45 1802 aa13.79□□□□□ -0.2
CNOT9-202ENST00000295701 NUBP1P53384 320 aa13.79□□□□□ -0.2
CNOT9-202ENST00000295701 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
CNOT9-202ENST00000295701 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
CNOT9-202ENST00000295701 GLI3P10071 1580 aa13.79□□□□□ -0.2
CNOT9-202ENST00000295701 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
CNOT9-202ENST00000295701 PRAM1Q96QH2 718 aa13.78□□□□□ -0.2
CNOT9-202ENST00000295701 SLIT2O94813 1529 aa13.78□□□□□ -0.2
CNOT9-202ENST00000295701 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
CNOT9-202ENST00000295701 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
CNOT9-202ENST00000295701 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
CNOT9-202ENST00000295701 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
CNOT9-202ENST00000295701 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.77□□□□□ -0.21
CNOT9-202ENST00000295701 NRXN1Q9ULB1 1477 aa13.76□□□□□ -0.21
CNOT9-202ENST00000295701 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
CNOT9-202ENST00000295701 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
CNOT9-202ENST00000295701 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
CNOT9-202ENST00000295701 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-202ENST00000295701 LHX8Q68G74 356 aa13.75□□□□□ -0.21
CNOT9-202ENST00000295701 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
CNOT9-202ENST00000295701 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-202ENST00000295701 PSME1Q06323 249 aa13.74□□□□□ -0.21
CNOT9-202ENST00000295701 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-202ENST00000295701 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
CNOT9-202ENST00000295701 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 POGKQ9P215 609 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 TRAK1Q9UPV9 953 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
CNOT9-202ENST00000295701 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
CNOT9-202ENST00000295701 RAB3GAP2Q9H2M9 1393 aa13.72□□□□□ -0.21
CNOT9-202ENST00000295701 VPS72Q15906 364 aa13.72□□□□□ -0.21
CNOT9-202ENST00000295701 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
CNOT9-202ENST00000295701 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
CNOT9-202ENST00000295701 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
CNOT9-202ENST00000295701 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.21
CNOT9-202ENST00000295701 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CNOT9-202ENST00000295701 PRR36Q9H6K5 1346 aa13.7□□□□□ -0.22
CNOT9-202ENST00000295701 ADGRB1O14514 1584 aa13.7□□□□□ -0.22
CNOT9-202ENST00000295701 MAP3K13O43283 966 aa13.69□□□□□ -0.22
CNOT9-202ENST00000295701 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-202ENST00000295701 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
CNOT9-202ENST00000295701 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
CNOT9-202ENST00000295701 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
CNOT9-202ENST00000295701 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
CNOT9-202ENST00000295701 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
CNOT9-202ENST00000295701 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
CNOT9-202ENST00000295701 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
CNOT9-202ENST00000295701 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
CNOT9-202ENST00000295701 ANKARQ7Z5J8 1434 aa13.66□□□□□ -0.22
CNOT9-202ENST00000295701 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
CNOT9-202ENST00000295701 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
CNOT9-202ENST00000295701 BTG4Q9NY30 223 aa13.66□□□□□ -0.22
CNOT9-202ENST00000295701 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
CNOT9-202ENST00000295701 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.22
CNOT9-202ENST00000295701 NRAPQ86VF7 1730 aa13.65□□□□□ -0.22
CNOT9-202ENST00000295701 A0A0G2JS52 829 aa13.65□□□□□ -0.22
CNOT9-202ENST00000295701 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
CNOT9-202ENST00000295701 MYT1Q01538 1121 aa13.65□□□□□ -0.22
CNOT9-202ENST00000295701 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
CNOT9-202ENST00000295701 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
CNOT9-202ENST00000295701 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
CNOT9-202ENST00000295701 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
CNOT9-202ENST00000295701 SF3B2Q13435 895 aaKnown RBP13.63□□□□□ -0.23
CNOT9-202ENST00000295701 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
CNOT9-202ENST00000295701 NGDNQ8NEJ9 315 aaKnown RBP13.63□□□□□ -0.23
CNOT9-202ENST00000295701 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
CNOT9-202ENST00000295701 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
CNOT9-202ENST00000295701 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
CNOT9-202ENST00000295701 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
CNOT9-202ENST00000295701 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
CNOT9-202ENST00000295701 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
CNOT9-202ENST00000295701 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
CNOT9-202ENST00000295701 CHRNA2Q15822 529 aa13.6□□□□□ -0.23
CNOT9-202ENST00000295701 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
CNOT9-202ENST00000295701 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
CNOT9-202ENST00000295701 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
CNOT9-202ENST00000295701 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms