RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MARF1Q9Y4F3 1742 aaKnown RBP12.16□□□□□ -0.46
PDPN-201ENST00000294489 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
PDPN-201ENST00000294489 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
PDPN-201ENST00000294489 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
PDPN-201ENST00000294489 USP6P35125 1406 aa12.15□□□□□ -0.46
PDPN-201ENST00000294489 AATKQ6ZMQ8 1374 aa12.15□□□□□ -0.46
PDPN-201ENST00000294489 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
PDPN-201ENST00000294489 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.47
PDPN-201ENST00000294489 ADGRL3Q9HAR2 1447 aa12.15□□□□□ -0.47
PDPN-201ENST00000294489 ZNF521Q96K83 1311 aa12.14□□□□□ -0.47
PDPN-201ENST00000294489 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
PDPN-201ENST00000294489 MTHFSP49914 203 aa12.14□□□□□ -0.47
PDPN-201ENST00000294489 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
PDPN-201ENST00000294489 NGEFQ8N5V2 710 aa12.13□□□□□ -0.47
PDPN-201ENST00000294489 RNF123Q5XPI4 1314 aa12.12□□□□□ -0.47
PDPN-201ENST00000294489 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
PDPN-201ENST00000294489 ACEP12821 1306 aa12.12□□□□□ -0.47
PDPN-201ENST00000294489 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
PDPN-201ENST00000294489 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
PDPN-201ENST00000294489 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
PDPN-201ENST00000294489 PPP4R2Q9NY27 417 aa12.11□□□□□ -0.47
PDPN-201ENST00000294489 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
PDPN-201ENST00000294489 TTC21BQ7Z4L5 1316 aa12.1□□□□□ -0.47
PDPN-201ENST00000294489 NCOA3Q9Y6Q9 1424 aa12.1□□□□□ -0.47
PDPN-201ENST00000294489 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
PDPN-201ENST00000294489 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
PDPN-201ENST00000294489 NME9Q86XW9 330 aa12.09□□□□□ -0.47
PDPN-201ENST00000294489 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
PDPN-201ENST00000294489 XIRP1Q702N8 1843 aaKnown RBP12.08□□□□□ -0.48
PDPN-201ENST00000294489 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
PDPN-201ENST00000294489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDPN-201ENST00000294489 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
PDPN-201ENST00000294489 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
PDPN-201ENST00000294489 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
PDPN-201ENST00000294489 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
PDPN-201ENST00000294489 RCAN3Q9UKA8 241 aa12.06□□□□□ -0.48
PDPN-201ENST00000294489 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
PDPN-201ENST00000294489 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
PDPN-201ENST00000294489 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
PDPN-201ENST00000294489 DCCP43146 1447 aa12.06□□□□□ -0.48
PDPN-201ENST00000294489 COG3Q96JB2 828 aa12.05□□□□□ -0.48
PDPN-201ENST00000294489 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
PDPN-201ENST00000294489 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
PDPN-201ENST00000294489 PHRF1Q9P1Y6 1649 aaKnown RBP12.05□□□□□ -0.48
PDPN-201ENST00000294489 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
PDPN-201ENST00000294489 MST1RQ04912 1400 aa12.04□□□□□ -0.48
PDPN-201ENST00000294489 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
PDPN-201ENST00000294489 APAF1O14727 1248 aa12.03□□□□□ -0.48
PDPN-201ENST00000294489 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
PDPN-201ENST00000294489 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
PDPN-201ENST00000294489 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.48
PDPN-201ENST00000294489 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
PDPN-201ENST00000294489 IL13P35225 146 aa12.02□□□□□ -0.49
PDPN-201ENST00000294489 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
PDPN-201ENST00000294489 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
PDPN-201ENST00000294489 PMFBP1Q8TBY8 1022 aa12.01□□□□□ -0.49
PDPN-201ENST00000294489 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
PDPN-201ENST00000294489 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
PDPN-201ENST00000294489 KIF24Q5T7B8 1368 aa12□□□□□ -0.49
PDPN-201ENST00000294489 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
PDPN-201ENST00000294489 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
PDPN-201ENST00000294489 NFAT5O94916 1531 aa12□□□□□ -0.49
PDPN-201ENST00000294489 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
PDPN-201ENST00000294489 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
PDPN-201ENST00000294489 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
PDPN-201ENST00000294489 LTN1O94822 1766 aa12□□□□□ -0.49
PDPN-201ENST00000294489 FCHSD2O94868 740 aa12□□□□□ -0.49
PDPN-201ENST00000294489 WWC1Q8IX03 1113 aa12□□□□□ -0.49
PDPN-201ENST00000294489 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
PDPN-201ENST00000294489 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
PDPN-201ENST00000294489 FBLN1P23142 703 aa11.99□□□□□ -0.49
PDPN-201ENST00000294489 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDPN-201ENST00000294489 SLIT3O75094 1523 aa11.99□□□□□ -0.49
PDPN-201ENST00000294489 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
PDPN-201ENST00000294489 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
PDPN-201ENST00000294489 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
PDPN-201ENST00000294489 C19orf44Q9H6X5 657 aa11.99□□□□□ -0.49
PDPN-201ENST00000294489 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
PDPN-201ENST00000294489 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
PDPN-201ENST00000294489 E9PSI1 815 aa11.97□□□□□ -0.49
PDPN-201ENST00000294489 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
PDPN-201ENST00000294489 SBNO1A3KN83 1393 aa11.97□□□□□ -0.49
PDPN-201ENST00000294489 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
PDPN-201ENST00000294489 HSPA2P54652 639 aa11.97□□□□□ -0.49
PDPN-201ENST00000294489 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
PDPN-201ENST00000294489 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
PDPN-201ENST00000294489 CRYBG1Q9Y4K1 1723 aa11.96□□□□□ -0.49
PDPN-201ENST00000294489 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.5
PDPN-201ENST00000294489 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.5
PDPN-201ENST00000294489 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
PDPN-201ENST00000294489 RTL1A6NKG5 1358 aa11.95□□□□□ -0.5
PDPN-201ENST00000294489 FLT4P35916 1363 aa11.95□□□□□ -0.5
PDPN-201ENST00000294489 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
PDPN-201ENST00000294489 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
PDPN-201ENST00000294489 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms