RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
CCDC58-201ENST00000291458 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
CCDC58-201ENST00000291458 WASLO00401 505 aaPredicted RBP14.05□□□□□ -0.16
CCDC58-201ENST00000291458 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
CCDC58-201ENST00000291458 PROM2Q8N271 834 aa14.05□□□□□ -0.16
CCDC58-201ENST00000291458 EIF3AQ14152 1382 aaKnown RBP14.05□□□□□ -0.16
CCDC58-201ENST00000291458 ATP7BP35670 1465 aa14.05□□□□□ -0.16
CCDC58-201ENST00000291458 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
CCDC58-201ENST00000291458 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
CCDC58-201ENST00000291458 HAP1P54257 671 aaPredicted RBP14.04□□□□□ -0.16
CCDC58-201ENST00000291458 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
CCDC58-201ENST00000291458 PSME1Q06323 249 aa14.03□□□□□ -0.16
CCDC58-201ENST00000291458 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
CCDC58-201ENST00000291458 TONSLQ96HA7 1378 aa14.03□□□□□ -0.16
CCDC58-201ENST00000291458 SPATA31A3Q5VYP0 1347 aa14.02□□□□□ -0.17
CCDC58-201ENST00000291458 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
CCDC58-201ENST00000291458 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.17
CCDC58-201ENST00000291458 NGDNQ8NEJ9 315 aaKnown RBP14.01□□□□□ -0.17
CCDC58-201ENST00000291458 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
CCDC58-201ENST00000291458 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
CCDC58-201ENST00000291458 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
CCDC58-201ENST00000291458 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
CCDC58-201ENST00000291458 CDK19Q9BWU1 502 aa14□□□□□ -0.17
CCDC58-201ENST00000291458 RXRBP28702 533 aa13.99□□□□□ -0.17
CCDC58-201ENST00000291458 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
CCDC58-201ENST00000291458 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
CCDC58-201ENST00000291458 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
CCDC58-201ENST00000291458 NUDT16Q96DE0 195 aaKnown RBP13.99□□□□□ -0.17
CCDC58-201ENST00000291458 USP21Q9UK80 565 aa13.99□□□□□ -0.17
CCDC58-201ENST00000291458 SBNO1A3KN83 1393 aa13.98□□□□□ -0.17
CCDC58-201ENST00000291458 QTRT2Q9H974 415 aaKnown RBP13.98□□□□□ -0.17
CCDC58-201ENST00000291458 RGS12O14924 1447 aa13.98□□□□□ -0.17
CCDC58-201ENST00000291458 ARHGEF10O15013 1369 aa13.97□□□□□ -0.17
CCDC58-201ENST00000291458 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CCDC58-201ENST00000291458 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
CCDC58-201ENST00000291458 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
CCDC58-201ENST00000291458 PPIP5K1Q6PFW1 1433 aa13.96□□□□□ -0.18
CCDC58-201ENST00000291458 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
CCDC58-201ENST00000291458 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
CCDC58-201ENST00000291458 RALGAPBQ86X10 1494 aa13.94□□□□□ -0.18
CCDC58-201ENST00000291458 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
CCDC58-201ENST00000291458 ATRNO75882 1429 aa13.94□□□□□ -0.18
CCDC58-201ENST00000291458 ACEP12821 1306 aa13.93□□□□□ -0.18
CCDC58-201ENST00000291458 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
CCDC58-201ENST00000291458 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
CCDC58-201ENST00000291458 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
CCDC58-201ENST00000291458 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
CCDC58-201ENST00000291458 NWD2Q9ULI1 1742 aa13.92□□□□□ -0.18
CCDC58-201ENST00000291458 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
CCDC58-201ENST00000291458 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
CCDC58-201ENST00000291458 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
CCDC58-201ENST00000291458 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
CCDC58-201ENST00000291458 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
CCDC58-201ENST00000291458 CCDC61Q9Y6R9 512 aa13.91□□□□□ -0.18
CCDC58-201ENST00000291458 EVC2Q86UK5 1308 aa13.9□□□□□ -0.18
CCDC58-201ENST00000291458 SLIT2O94813 1529 aa13.9□□□□□ -0.18
CCDC58-201ENST00000291458 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
CCDC58-201ENST00000291458 GLI3P10071 1580 aa13.9□□□□□ -0.18
CCDC58-201ENST00000291458 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
CCDC58-201ENST00000291458 NRKQ7Z2Y5 1582 aa13.89□□□□□ -0.19
CCDC58-201ENST00000291458 AKAP12Q02952 1782 aa13.88□□□□□ -0.19
CCDC58-201ENST00000291458 A0A0G2JS52 829 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 MYT1Q01538 1121 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 BRWD3Q6RI45 1802 aa13.87□□□□□ -0.19
CCDC58-201ENST00000291458 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
CCDC58-201ENST00000291458 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
CCDC58-201ENST00000291458 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
CCDC58-201ENST00000291458 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
CCDC58-201ENST00000291458 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
CCDC58-201ENST00000291458 USP6P35125 1406 aa13.85□□□□□ -0.19
CCDC58-201ENST00000291458 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
CCDC58-201ENST00000291458 ZC3H6P61129 1189 aaKnown RBP13.85□□□□□ -0.19
CCDC58-201ENST00000291458 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
CCDC58-201ENST00000291458 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
CCDC58-201ENST00000291458 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC58-201ENST00000291458 STRN4Q9NRL3 753 aa13.83□□□□□ -0.2
CCDC58-201ENST00000291458 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.2
CCDC58-201ENST00000291458 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
CCDC58-201ENST00000291458 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
CCDC58-201ENST00000291458 SOX12O15370 315 aa13.82□□□□□ -0.2
CCDC58-201ENST00000291458 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
CCDC58-201ENST00000291458 VPS72Q15906 364 aa13.81□□□□□ -0.2
CCDC58-201ENST00000291458 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
CCDC58-201ENST00000291458 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
CCDC58-201ENST00000291458 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
CCDC58-201ENST00000291458 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
CCDC58-201ENST00000291458 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
CCDC58-201ENST00000291458 NLRP6P59044 892 aa13.79□□□□□ -0.2
CCDC58-201ENST00000291458 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
CCDC58-201ENST00000291458 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
CCDC58-201ENST00000291458 USP19O94966 1318 aa13.79□□□□□ -0.2
CCDC58-201ENST00000291458 USP47Q96K76 1375 aa13.79□□□□□ -0.2
CCDC58-201ENST00000291458 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
CCDC58-201ENST00000291458 ST20-MTHFSA0A0A6YYL1 179 aa13.78□□□□□ -0.2
CCDC58-201ENST00000291458 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
CCDC58-201ENST00000291458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■□ 20.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms