RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.26
C9orf43-201ENST00000288462 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
C9orf43-201ENST00000288462 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
C9orf43-201ENST00000288462 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
C9orf43-201ENST00000288462 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
C9orf43-201ENST00000288462 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
C9orf43-201ENST00000288462 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
C9orf43-201ENST00000288462 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
C9orf43-201ENST00000288462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
C9orf43-201ENST00000288462 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
C9orf43-201ENST00000288462 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
C9orf43-201ENST00000288462 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
C9orf43-201ENST00000288462 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
C9orf43-201ENST00000288462 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
C9orf43-201ENST00000288462 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
C9orf43-201ENST00000288462 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
C9orf43-201ENST00000288462 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
C9orf43-201ENST00000288462 USP6P35125 1406 aa13.42□□□□□ -0.26
C9orf43-201ENST00000288462 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
C9orf43-201ENST00000288462 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
C9orf43-201ENST00000288462 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
C9orf43-201ENST00000288462 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
C9orf43-201ENST00000288462 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
C9orf43-201ENST00000288462 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
C9orf43-201ENST00000288462 NME9Q86XW9 330 aa13.4□□□□□ -0.26
C9orf43-201ENST00000288462 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
C9orf43-201ENST00000288462 LRRC7Q96NW7 1537 aa13.4□□□□□ -0.26
C9orf43-201ENST00000288462 KCNA6P17658 529 aa13.4□□□□□ -0.26
C9orf43-201ENST00000288462 ACEP12821 1306 aa13.39□□□□□ -0.27
C9orf43-201ENST00000288462 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
C9orf43-201ENST00000288462 E9PSI1 815 aa13.39□□□□□ -0.27
C9orf43-201ENST00000288462 U2AF1L5P0DN76 240 aaPredicted RBP13.39□□□□□ -0.27
C9orf43-201ENST00000288462 U2AF1Q01081 240 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf43-201ENST00000288462 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
C9orf43-201ENST00000288462 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
C9orf43-201ENST00000288462 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
C9orf43-201ENST00000288462 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
C9orf43-201ENST00000288462 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
C9orf43-201ENST00000288462 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
C9orf43-201ENST00000288462 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
C9orf43-201ENST00000288462 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
C9orf43-201ENST00000288462 COG3Q96JB2 828 aa13.37□□□□□ -0.27
C9orf43-201ENST00000288462 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
C9orf43-201ENST00000288462 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
C9orf43-201ENST00000288462 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
C9orf43-201ENST00000288462 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
C9orf43-201ENST00000288462 PEAK1Q9H792 1746 aa13.35□□□□□ -0.27
C9orf43-201ENST00000288462 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
C9orf43-201ENST00000288462 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
C9orf43-201ENST00000288462 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
C9orf43-201ENST00000288462 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
C9orf43-201ENST00000288462 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
C9orf43-201ENST00000288462 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
C9orf43-201ENST00000288462 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
C9orf43-201ENST00000288462 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
C9orf43-201ENST00000288462 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
C9orf43-201ENST00000288462 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
C9orf43-201ENST00000288462 FBLN1P23142 703 aa13.33□□□□□ -0.28
C9orf43-201ENST00000288462 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
C9orf43-201ENST00000288462 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 FCHSD2O94868 740 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 IL13P35225 146 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
C9orf43-201ENST00000288462 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
C9orf43-201ENST00000288462 EXOC6Q8TAG9 804 aa13.3□□□□□ -0.28
C9orf43-201ENST00000288462 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
C9orf43-201ENST00000288462 PMFBP1Q8TBY8 1022 aa13.3□□□□□ -0.28
C9orf43-201ENST00000288462 RRS1Q15050 365 aaKnown RBP13.29□□□□□ -0.28
C9orf43-201ENST00000288462 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
C9orf43-201ENST00000288462 PLIN1O60240 522 aa13.28□□□□□ -0.28
C9orf43-201ENST00000288462 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
C9orf43-201ENST00000288462 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
C9orf43-201ENST00000288462 CCDC136Q96JN2 1154 aa13.28□□□□□ -0.28
C9orf43-201ENST00000288462 IL16Q14005 1332 aa13.27□□□□□ -0.28
C9orf43-201ENST00000288462 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.28
C9orf43-201ENST00000288462 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
C9orf43-201ENST00000288462 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
C9orf43-201ENST00000288462 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
C9orf43-201ENST00000288462 CRBNQ96SW2 442 aa13.25□□□□□ -0.29
C9orf43-201ENST00000288462 KIF1AQ12756 1690 aa13.25□□□□□ -0.29
C9orf43-201ENST00000288462 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
C9orf43-201ENST00000288462 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
C9orf43-201ENST00000288462 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
C9orf43-201ENST00000288462 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
C9orf43-201ENST00000288462 RIPK4P57078 832 aa13.24□□□□□ -0.29
C9orf43-201ENST00000288462 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
C9orf43-201ENST00000288462 FLT4P35916 1363 aa13.24□□□□□ -0.29
C9orf43-201ENST00000288462 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
C9orf43-201ENST00000288462 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
C9orf43-201ENST00000288462 LTN1O94822 1766 aa13.23□□□□□ -0.29
C9orf43-201ENST00000288462 HMOX1P09601 288 aa13.23□□□□□ -0.29
C9orf43-201ENST00000288462 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
C9orf43-201ENST00000288462 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
C9orf43-201ENST00000288462 MAP3K19Q56UN5 1328 aa13.23□□□□□ -0.29
C9orf43-201ENST00000288462 BCAR3O75815 825 aa13.22□□□□□ -0.29
C9orf43-201ENST00000288462 NEFMP07197 916 aa13.22□□□□□ -0.29
C9orf43-201ENST00000288462 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
C9orf43-201ENST00000288462 NFAT5O94916 1531 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms