RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
HMGCR-201ENST00000287936 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
HMGCR-201ENST00000287936 ABCC3O15438 1527 aa12.59□□□□□ -0.39
HMGCR-201ENST00000287936 A0A1W2PP64 1363 aa12.59□□□□□ -0.39
HMGCR-201ENST00000287936 HMOX1P09601 288 aa12.59□□□□□ -0.39
HMGCR-201ENST00000287936 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
HMGCR-201ENST00000287936 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
HMGCR-201ENST00000287936 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
HMGCR-201ENST00000287936 PPRC1Q5VV67 1664 aaKnown RBP12.58□□□□□ -0.4
HMGCR-201ENST00000287936 FYB1O15117 783 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
HMGCR-201ENST00000287936 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 PTMSP20962 102 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
HMGCR-201ENST00000287936 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
HMGCR-201ENST00000287936 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
HMGCR-201ENST00000287936 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
HMGCR-201ENST00000287936 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
HMGCR-201ENST00000287936 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
HMGCR-201ENST00000287936 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
HMGCR-201ENST00000287936 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
HMGCR-201ENST00000287936 GBP4Q96PP9 640 aa12.55□□□□□ -0.4
HMGCR-201ENST00000287936 HMMRO75330 724 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 TRIM27P14373 513 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 ARXQ96QS3 562 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 KIDINS220Q9ULH0 1771 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 SOX12O15370 315 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 CHMP5Q9NZZ3 219 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
HMGCR-201ENST00000287936 TXNDC2Q86VQ3 553 aa12.53□□□□□ -0.4
HMGCR-201ENST00000287936 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
HMGCR-201ENST00000287936 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
HMGCR-201ENST00000287936 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
HMGCR-201ENST00000287936 HDAC1Q13547 482 aaPredicted RBP12.53□□□□□ -0.4
HMGCR-201ENST00000287936 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
HMGCR-201ENST00000287936 WAPLQ7Z5K2 1190 aa12.53□□□□□ -0.4
HMGCR-201ENST00000287936 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
HMGCR-201ENST00000287936 WASLO00401 505 aaPredicted RBP12.52□□□□□ -0.4
HMGCR-201ENST00000287936 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.4
HMGCR-201ENST00000287936 RLBP1P12271 317 aa12.52□□□□□ -0.41
HMGCR-201ENST00000287936 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
HMGCR-201ENST00000287936 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
HMGCR-201ENST00000287936 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
HMGCR-201ENST00000287936 DDX11L8A8MPP1 907 aa12.52□□□□□ -0.41
HMGCR-201ENST00000287936 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
HMGCR-201ENST00000287936 GLI2P10070 1586 aa12.51□□□□□ -0.41
HMGCR-201ENST00000287936 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
HMGCR-201ENST00000287936 AMPHP49418 695 aa12.5□□□□□ -0.41
HMGCR-201ENST00000287936 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
HMGCR-201ENST00000287936 MROH1Q8NDA8 1641 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 TNNQ9UQP3 1299 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 CAMSAP1Q5T5Y3 1602 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
HMGCR-201ENST00000287936 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
HMGCR-201ENST00000287936 NME9Q86XW9 330 aa12.48□□□□□ -0.41
HMGCR-201ENST00000287936 ARHGAP45Q92619 1136 aa12.48□□□□□ -0.41
HMGCR-201ENST00000287936 MYO3AQ8NEV4 1616 aa12.48□□□□□ -0.41
HMGCR-201ENST00000287936 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
HMGCR-201ENST00000287936 MCCP23508 829 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 MYOM1P52179 1685 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 CDC45O75419 566 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-201ENST00000287936 MROH2AA6NES4 1674 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
HMGCR-201ENST00000287936 TRIM44Q96DX7 344 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-201ENST00000287936 APBB1O00213 710 aa12.46□□□□□ -0.41
HMGCR-201ENST00000287936 PPIP5K1Q6PFW1 1433 aa12.46□□□□□ -0.41
HMGCR-201ENST00000287936 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.42
HMGCR-201ENST00000287936 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
HMGCR-201ENST00000287936 ADGRB1O14514 1584 aa12.45□□□□□ -0.42
HMGCR-201ENST00000287936 SLC4A10Q6U841 1118 aa12.45□□□□□ -0.42
HMGCR-201ENST00000287936 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
HMGCR-201ENST00000287936 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
HMGCR-201ENST00000287936 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
HMGCR-201ENST00000287936 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
HMGCR-201ENST00000287936 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 PPLO60437 1756 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
HMGCR-201ENST00000287936 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
HMGCR-201ENST00000287936 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
HMGCR-201ENST00000287936 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
HMGCR-201ENST00000287936 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 ST18O60284 1047 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms