RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 MRE11P49959 708 aa16.6■□□□□ 0.25
VAMP7-202ENST00000286448 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
VAMP7-202ENST00000286448 RLBP1P12271 317 aa16.6■□□□□ 0.25
VAMP7-202ENST00000286448 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
VAMP7-202ENST00000286448 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
VAMP7-202ENST00000286448 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
VAMP7-202ENST00000286448 TRAK2O60296 914 aa16.59■□□□□ 0.25
VAMP7-202ENST00000286448 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
VAMP7-202ENST00000286448 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
VAMP7-202ENST00000286448 ZMYND15Q9H091 742 aa16.59■□□□□ 0.25
VAMP7-202ENST00000286448 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
VAMP7-202ENST00000286448 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.25
VAMP7-202ENST00000286448 AAMPQ13685 434 aa16.58■□□□□ 0.25
VAMP7-202ENST00000286448 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.25
VAMP7-202ENST00000286448 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
VAMP7-202ENST00000286448 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
VAMP7-202ENST00000286448 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
VAMP7-202ENST00000286448 PTPRMP28827 1452 aa16.57■□□□□ 0.24
VAMP7-202ENST00000286448 ANKRD36BQ8N2N9 1353 aa16.57■□□□□ 0.24
VAMP7-202ENST00000286448 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
VAMP7-202ENST00000286448 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
VAMP7-202ENST00000286448 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
VAMP7-202ENST00000286448 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
VAMP7-202ENST00000286448 GRPEL1Q9HAV7 217 aa16.55■□□□□ 0.24
VAMP7-202ENST00000286448 CD163L1Q9NR16 1453 aa16.55■□□□□ 0.24
VAMP7-202ENST00000286448 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
VAMP7-202ENST00000286448 ESPNB1AK53 854 aa16.54■□□□□ 0.24
VAMP7-202ENST00000286448 FYB1O15117 783 aa16.53■□□□□ 0.24
VAMP7-202ENST00000286448 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
VAMP7-202ENST00000286448 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
VAMP7-202ENST00000286448 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
VAMP7-202ENST00000286448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
VAMP7-202ENST00000286448 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
VAMP7-202ENST00000286448 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
VAMP7-202ENST00000286448 CABP1Q9NZU7 370 aa16.52■□□□□ 0.24
VAMP7-202ENST00000286448 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
VAMP7-202ENST00000286448 SLC24A1O60721 1099 aa16.52■□□□□ 0.23
VAMP7-202ENST00000286448 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.23
VAMP7-202ENST00000286448 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.23
VAMP7-202ENST00000286448 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.23
VAMP7-202ENST00000286448 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
VAMP7-202ENST00000286448 USP32Q8NFA0 1604 aa16.51■□□□□ 0.23
VAMP7-202ENST00000286448 ERBB4Q15303 1308 aa16.51■□□□□ 0.23
VAMP7-202ENST00000286448 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
VAMP7-202ENST00000286448 CDK19Q9BWU1 502 aa16.5■□□□□ 0.23
VAMP7-202ENST00000286448 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
VAMP7-202ENST00000286448 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
VAMP7-202ENST00000286448 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
VAMP7-202ENST00000286448 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
VAMP7-202ENST00000286448 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
VAMP7-202ENST00000286448 CLTCQ00610 1675 aaKnown RBP16.49■□□□□ 0.23
VAMP7-202ENST00000286448 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
VAMP7-202ENST00000286448 DIP2BQ9P265 1576 aa16.48■□□□□ 0.23
VAMP7-202ENST00000286448 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
VAMP7-202ENST00000286448 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
VAMP7-202ENST00000286448 CFAP53Q96M91 514 aa16.48■□□□□ 0.23
VAMP7-202ENST00000286448 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
VAMP7-202ENST00000286448 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
VAMP7-202ENST00000286448 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
VAMP7-202ENST00000286448 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
VAMP7-202ENST00000286448 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
VAMP7-202ENST00000286448 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
VAMP7-202ENST00000286448 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
VAMP7-202ENST00000286448 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
VAMP7-202ENST00000286448 TPM2P07951 284 aa16.44■□□□□ 0.22
VAMP7-202ENST00000286448 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
VAMP7-202ENST00000286448 DDIT3P35638 169 aa16.43■□□□□ 0.22
VAMP7-202ENST00000286448 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
VAMP7-202ENST00000286448 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
VAMP7-202ENST00000286448 HMOX1P09601 288 aa16.43■□□□□ 0.22
VAMP7-202ENST00000286448 MVPQ14764 893 aaKnown RBP16.43■□□□□ 0.22
VAMP7-202ENST00000286448 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
VAMP7-202ENST00000286448 A2ML1A8K2U0 1454 aa16.42■□□□□ 0.22
VAMP7-202ENST00000286448 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
VAMP7-202ENST00000286448 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
VAMP7-202ENST00000286448 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
VAMP7-202ENST00000286448 METP08581 1390 aa16.42■□□□□ 0.22
VAMP7-202ENST00000286448 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
VAMP7-202ENST00000286448 NME9Q86XW9 330 aa16.41■□□□□ 0.22
VAMP7-202ENST00000286448 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
VAMP7-202ENST00000286448 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
VAMP7-202ENST00000286448 NSD2O96028 1365 aa16.4■□□□□ 0.22
VAMP7-202ENST00000286448 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
VAMP7-202ENST00000286448 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
VAMP7-202ENST00000286448 TERF2IPQ9NYB0 399 aa16.4■□□□□ 0.22
VAMP7-202ENST00000286448 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
VAMP7-202ENST00000286448 RIPK4P57078 832 aa16.39■□□□□ 0.21
VAMP7-202ENST00000286448 GBP4Q96PP9 640 aa16.39■□□□□ 0.21
VAMP7-202ENST00000286448 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
VAMP7-202ENST00000286448 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
VAMP7-202ENST00000286448 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
VAMP7-202ENST00000286448 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
VAMP7-202ENST00000286448 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
VAMP7-202ENST00000286448 SNX21Q969T3 373 aa16.38■□□□□ 0.21
VAMP7-202ENST00000286448 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
VAMP7-202ENST00000286448 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
VAMP7-202ENST00000286448 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
VAMP7-202ENST00000286448 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
VAMP7-202ENST00000286448 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
VAMP7-202ENST00000286448 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms