RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ARHGAP23Q9P227 1491 aa23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 THEMISQ8N1K5 641 aaPredicted RBP23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 DDRGK1Q96HY6 314 aa23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 SLIT1O75093 1534 aa23.79■■□□□ 1.4
PDLIM3-201ENST00000284767 MED14O60244 1454 aa23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 U2AF1L5P0DN76 240 aaPredicted RBP23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 U2AF1Q01081 240 aaKnown RBP eCLIP23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 ATP7BP35670 1465 aa23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 SLFN5Q08AF3 891 aa23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 CRBNQ96SW2 442 aa23.78■■□□□ 1.4
PDLIM3-201ENST00000284767 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.77■■□□□ 1.4
PDLIM3-201ENST00000284767 NEFMP07197 916 aa23.77■■□□□ 1.4
PDLIM3-201ENST00000284767 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.4
PDLIM3-201ENST00000284767 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
PDLIM3-201ENST00000284767 NME9Q86XW9 330 aa23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 TCP11L2Q8N4U5 519 aa23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 CPSF1Q10570 1443 aaKnown RBP23.76■■□□□ 1.39
PDLIM3-201ENST00000284767 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
PDLIM3-201ENST00000284767 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
PDLIM3-201ENST00000284767 LAS1LQ9Y4W2 734 aaKnown RBP23.74■■□□□ 1.39
PDLIM3-201ENST00000284767 WWC1Q8IX03 1113 aa23.74■■□□□ 1.39
PDLIM3-201ENST00000284767 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
PDLIM3-201ENST00000284767 TRMT2AQ8IZ69 625 aaKnown RBP23.71■■□□□ 1.39
PDLIM3-201ENST00000284767 TBX22Q9Y458 520 aa23.71■■□□□ 1.39
PDLIM3-201ENST00000284767 COL3A1P02461 1466 aaPredicted RBP23.71■■□□□ 1.39
PDLIM3-201ENST00000284767 KDM2BQ8NHM5 1336 aa23.7■■□□□ 1.38
PDLIM3-201ENST00000284767 IQSEC2Q5JU85 1478 aa23.7■■□□□ 1.38
PDLIM3-201ENST00000284767 C20orf194Q5TEA3 1177 aa23.7■■□□□ 1.38
PDLIM3-201ENST00000284767 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
PDLIM3-201ENST00000284767 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
PDLIM3-201ENST00000284767 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
PDLIM3-201ENST00000284767 POLKQ9UBT6 870 aa23.69■■□□□ 1.38
PDLIM3-201ENST00000284767 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-201ENST00000284767 EMILIN1Q9Y6C2 1016 aa23.67■■□□□ 1.38
PDLIM3-201ENST00000284767 E9PSI1 815 aa23.66■■□□□ 1.38
PDLIM3-201ENST00000284767 DIAPH1O60610 1272 aaKnown RBP23.65■■□□□ 1.38
PDLIM3-201ENST00000284767 KCNA6P17658 529 aa23.65■■□□□ 1.38
PDLIM3-201ENST00000284767 ACEP12821 1306 aa23.65■■□□□ 1.38
PDLIM3-201ENST00000284767 NKTRP30414 1462 aaKnown RBP23.64■■□□□ 1.37
PDLIM3-201ENST00000284767 ADGRB2O60241 1585 aa23.64■■□□□ 1.37
PDLIM3-201ENST00000284767 PLEKHF1Q96S99 279 aa23.63■■□□□ 1.37
PDLIM3-201ENST00000284767 PNPLA6Q8IY17 1366 aa23.63■■□□□ 1.37
PDLIM3-201ENST00000284767 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
PDLIM3-201ENST00000284767 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
PDLIM3-201ENST00000284767 MON2Q7Z3U7 1717 aa23.63■■□□□ 1.37
PDLIM3-201ENST00000284767 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
PDLIM3-201ENST00000284767 MAP2P11137 1827 aaKnown RBP23.62■■□□□ 1.37
PDLIM3-201ENST00000284767 BCAR3O75815 825 aa23.62■■□□□ 1.37
PDLIM3-201ENST00000284767 NGEFQ8N5V2 710 aa23.62■■□□□ 1.37
PDLIM3-201ENST00000284767 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
PDLIM3-201ENST00000284767 ITSN1Q15811 1721 aa23.61■■□□□ 1.37
PDLIM3-201ENST00000284767 AKAP12Q02952 1782 aa23.61■■□□□ 1.37
PDLIM3-201ENST00000284767 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.61■■□□□ 1.37
PDLIM3-201ENST00000284767 COG3Q96JB2 828 aa23.61■■□□□ 1.37
PDLIM3-201ENST00000284767 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
PDLIM3-201ENST00000284767 SKAP1Q86WV1 359 aa23.59■■□□□ 1.37
PDLIM3-201ENST00000284767 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
PDLIM3-201ENST00000284767 ZNF692Q9BU19 519 aaPredicted RBP23.59■■□□□ 1.37
PDLIM3-201ENST00000284767 FAM161AQ3B820 660 aa23.58■■□□□ 1.37
PDLIM3-201ENST00000284767 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
PDLIM3-201ENST00000284767 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.36
PDLIM3-201ENST00000284767 PLEKHG3A1L390 1219 aa23.57■■□□□ 1.36
PDLIM3-201ENST00000284767 HMOX1P09601 288 aa23.56■■□□□ 1.36
PDLIM3-201ENST00000284767 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
PDLIM3-201ENST00000284767 DIP2AQ14689 1571 aa23.56■■□□□ 1.36
PDLIM3-201ENST00000284767 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
PDLIM3-201ENST00000284767 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
PDLIM3-201ENST00000284767 SOX12O15370 315 aa23.55■■□□□ 1.36
PDLIM3-201ENST00000284767 IL27Q8NEV9 243 aa23.55■■□□□ 1.36
PDLIM3-201ENST00000284767 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
PDLIM3-201ENST00000284767 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
PDLIM3-201ENST00000284767 CCDC27Q2M243 656 aa23.54■■□□□ 1.36
PDLIM3-201ENST00000284767 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
PDLIM3-201ENST00000284767 WDR63Q8IWG1 891 aa23.53■■□□□ 1.36
PDLIM3-201ENST00000284767 TRIM35Q9UPQ4 493 aa23.53■■□□□ 1.36
PDLIM3-201ENST00000284767 USP6P35125 1406 aa23.53■■□□□ 1.36
PDLIM3-201ENST00000284767 PRKAR2BP31323 418 aa23.52■■□□□ 1.36
PDLIM3-201ENST00000284767 C8orf34Q49A92 452 aa23.52■■□□□ 1.36
PDLIM3-201ENST00000284767 NFKBIBQ15653 356 aa23.52■■□□□ 1.36
PDLIM3-201ENST00000284767 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
PDLIM3-201ENST00000284767 LRRC7Q96NW7 1537 aa23.51■■□□□ 1.35
PDLIM3-201ENST00000284767 GSE1Q14687 1217 aa23.51■■□□□ 1.35
PDLIM3-201ENST00000284767 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
PDLIM3-201ENST00000284767 RSPH6AQ9H0K4 717 aa23.51■■□□□ 1.35
PDLIM3-201ENST00000284767 IL13P35225 146 aa23.5■■□□□ 1.35
PDLIM3-201ENST00000284767 RIPK4P57078 832 aa23.5■■□□□ 1.35
PDLIM3-201ENST00000284767 AATKQ6ZMQ8 1374 aa23.5■■□□□ 1.35
PDLIM3-201ENST00000284767 NGDNQ8NEJ9 315 aaKnown RBP23.5■■□□□ 1.35
PDLIM3-201ENST00000284767 PHACTR3Q96KR7 559 aa23.5■■□□□ 1.35
PDLIM3-201ENST00000284767 ZNF142P52746 1687 aaPredicted RBP23.49■■□□□ 1.35
PDLIM3-201ENST00000284767 BCL2L13Q9BXK5 485 aa23.48■■□□□ 1.35
PDLIM3-201ENST00000284767 FCHSD2O94868 740 aa23.48■■□□□ 1.35
PDLIM3-201ENST00000284767 CDK12Q9NYV4 1490 aaPredicted RBP23.48■■□□□ 1.35
PDLIM3-201ENST00000284767 SETD1BQ9UPS6 1966 aaKnown RBP23.47■■□□□ 1.35
PDLIM3-201ENST00000284767 OVOS2A0A0J9YW53 1432 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms