RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 METP08581 1390 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 NUDT16Q96DE0 195 aaKnown RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 NOB1Q9ULX3 412 aaKnown RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 CTTNBP2Q8WZ74 1663 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 PDZRN3Q9UPQ7 1066 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 EVC2Q86UK5 1308 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 PRR36Q9H6K5 1346 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 ANP32AP39687 249 aaKnown RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 PIP4K2AP48426 406 aaPredicted RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 SLC4A10Q6U841 1118 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 CNPY4Q8N129 248 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 NGDNQ8NEJ9 315 aaKnown RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 SULT6B1Q6IMI4 303 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 JARID2Q92833 1246 aaPredicted RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 COL17A1Q9UMD9 1497 aaPredicted RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 LRPPRCP42704 1394 aaKnown RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 F6X3S4 739 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 POLKQ9UBT6 870 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 SHROOM2Q13796 1616 aa4.68□□□□□ -1.66
RAB3C-201ENST00000282878 SMARCA5O60264 1052 aaPredicted RBP4.68□□□□□ -1.66
RAB3C-201ENST00000282878 A0A0G2JS52 829 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 TSHZ3Q63HK5 1081 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 LRRC59Q96AG4 307 aaKnown RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 RUNDC1Q96C34 613 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 DNMT1P26358 1616 aaKnown RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 NGEFQ8N5V2 710 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 C8orf58Q8NAV2 365 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 LNPKQ9C0E8 428 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 A0A1W2PP64 1363 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 SPDYE4A6NLX3 237 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 CCDC82Q8N4S0 544 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 CABLES1Q8TDN4 633 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 SSH1Q8WYL5 1049 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 MCCP23508 829 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 C16orf71Q8IYS4 520 aaPredicted RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 AMOTL2Q9Y2J4 779 aa4.67□□□□□ -1.66
RAB3C-201ENST00000282878 RARSP54136 660 aaKnown RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 EIF2S2P20042 333 aaKnown RBP4.67□□□□□ -1.66
RAB3C-201ENST00000282878 DEKP35659 375 aaKnown RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 FTSJ3Q8IY81 847 aaKnown RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 SCAF11Q99590 1463 aaKnown RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 GPRASP1Q5JY77 1395 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 SMYD5Q6GMV2 418 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 PIAS4Q8N2W9 510 aaPredicted RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 SLC24A3Q9HC58 644 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 KCNA6P17658 529 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 TMEM57Q8N5G2 664 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 PPP6R1Q9UPN7 881 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 ERVK-7P63135 1459 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 TMPOP42166 694 aaKnown RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 ANAPC15P60006 121 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 CGNL1Q0VF96 1302 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 NLRP6P59044 892 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 TRIM35Q9UPQ4 493 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 ZC3H6P61129 1189 aaKnown RBP4.66□□□□□ -1.66
RAB3C-201ENST00000282878 G2E3Q7L622 706 aa4.66□□□□□ -1.66
RAB3C-201ENST00000282878 ACEP12821 1306 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 FANCIQ9NVI1 1328 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 OTUD7AQ8TE49 926 aaPredicted RBP4.65□□□□□ -1.66
RAB3C-201ENST00000282878 IPO9Q96P70 1041 aaKnown RBP4.65□□□□□ -1.66
RAB3C-201ENST00000282878 KCNQ3O43525 872 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 CALRP27797 417 aaKnown RBP4.65□□□□□ -1.66
RAB3C-201ENST00000282878 COG3Q96JB2 828 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 LRRIQ1Q96JM4 1722 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 HSP90AB4PQ58FF6 505 aa4.65□□□□□ -1.66
RAB3C-201ENST00000282878 RBM42Q9BTD8 480 aaKnown RBP4.65□□□□□ -1.66
RAB3C-201ENST00000282878 MAP4K4O95819 1239 aaPredicted RBP4.65□□□□□ -1.67
RAB3C-201ENST00000282878 ESCO1Q5FWF5 840 aa4.65□□□□□ -1.67
RAB3C-201ENST00000282878 TERF2IPQ9NYB0 399 aa4.65□□□□□ -1.67
RAB3C-201ENST00000282878 WASLO00401 505 aaPredicted RBP4.65□□□□□ -1.67
RAB3C-201ENST00000282878 BACH2Q9BYV9 841 aa4.65□□□□□ -1.67
RAB3C-201ENST00000282878 PRAMEF22A3QJZ6 481 aa4.65□□□□□ -1.67
RAB3C-201ENST00000282878 HSP90AA1P07900 732 aaKnown RBP4.65□□□□□ -1.67
RAB3C-201ENST00000282878 MYCNP04198 464 aaPredicted RBP4.64□□□□□ -1.67
RAB3C-201ENST00000282878 FLIIQ13045 1269 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 ORAI2Q96SN7 254 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 PDE3BQ13370 1112 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 CHRNA2Q15822 529 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 CHAMP1Q96JM3 812 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 MBIPQ9NS73 344 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 C8orf34Q49A92 452 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 EIF3AQ14152 1382 aaKnown RBP4.64□□□□□ -1.67
RAB3C-201ENST00000282878 RTEL1-TNFRSF6BF6WH68 1400 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 AMPHP49418 695 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 POGZQ7Z3K3 1410 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.64□□□□□ -1.67
RAB3C-201ENST00000282878 TRIM27P14373 513 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 MTHFSDQ2M296 383 aaKnown RBP4.64□□□□□ -1.67
RAB3C-201ENST00000282878 DDX54Q8TDD1 881 aaKnown RBP4.64□□□□□ -1.67
RAB3C-201ENST00000282878 SHANK2Q9UPX8 1470 aa4.64□□□□□ -1.67
RAB3C-201ENST00000282878 ANKRD62A6NC57 917 aa4.63□□□□□ -1.67
RAB3C-201ENST00000282878 FOSBP53539 338 aa4.63□□□□□ -1.67
RAB3C-201ENST00000282878 IFNLR1Q8IU57 520 aaPredicted RBP4.63□□□□□ -1.67
RAB3C-201ENST00000282878 DZIP1LQ8IYY4 767 aaKnown RBP4.63□□□□□ -1.67
RAB3C-201ENST00000282878 FRAT2O75474 233 aaPredicted RBP4.63□□□□□ -1.67
RAB3C-201ENST00000282878 EIF4A2Q14240 407 aaKnown RBP4.63□□□□□ -1.67
RAB3C-201ENST00000282878 LARP6Q9BRS8 491 aaKnown RBP4.63□□□□□ -1.67
RAB3C-201ENST00000282878 PRDM10Q9NQV6 1147 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms