RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-201ENST00000282841 RGPD8O14715 1765 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-201ENST00000282841 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-201ENST00000282841 CPSF1Q10570 1443 aaKnown RBP14.55□□□□□ -0.08
GGPS1-201ENST00000282841 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
GGPS1-201ENST00000282841 CFAP53Q96M91 514 aa14.55□□□□□ -0.08
GGPS1-201ENST00000282841 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-201ENST00000282841 COG3Q96JB2 828 aa14.54□□□□□ -0.08
GGPS1-201ENST00000282841 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
GGPS1-201ENST00000282841 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
GGPS1-201ENST00000282841 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
GGPS1-201ENST00000282841 ZNF142P52746 1687 aaPredicted RBP14.53□□□□□ -0.08
GGPS1-201ENST00000282841 ESCO1Q5FWF5 840 aa14.53□□□□□ -0.08
GGPS1-201ENST00000282841 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
GGPS1-201ENST00000282841 NSD2O96028 1365 aa14.52□□□□□ -0.08
GGPS1-201ENST00000282841 HMOX1P09601 288 aa14.52□□□□□ -0.09
GGPS1-201ENST00000282841 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
GGPS1-201ENST00000282841 DIP2AQ14689 1571 aa14.52□□□□□ -0.09
GGPS1-201ENST00000282841 EDC4Q6P2E9 1401 aaKnown RBP14.51□□□□□ -0.09
GGPS1-201ENST00000282841 PLEKHG3A1L390 1219 aa14.51□□□□□ -0.09
GGPS1-201ENST00000282841 TCP11L2Q8N4U5 519 aa14.51□□□□□ -0.09
GGPS1-201ENST00000282841 SMG6Q86US8 1419 aaKnown RBP14.51□□□□□ -0.09
GGPS1-201ENST00000282841 USP32Q8NFA0 1604 aa14.51□□□□□ -0.09
GGPS1-201ENST00000282841 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
GGPS1-201ENST00000282841 XRN1Q8IZH2 1706 aaKnown RBP14.5□□□□□ -0.09
GGPS1-201ENST00000282841 CDC42BPGQ6DT37 1551 aa14.5□□□□□ -0.09
GGPS1-201ENST00000282841 PLIN1O60240 522 aa14.49□□□□□ -0.09
GGPS1-201ENST00000282841 DDX17Q92841 729 aaKnown RBP14.49□□□□□ -0.09
GGPS1-201ENST00000282841 FOXO3O43524 673 aa14.49□□□□□ -0.09
GGPS1-201ENST00000282841 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
GGPS1-201ENST00000282841 ZBTB7CA1YPR0 619 aa14.48□□□□□ -0.09
GGPS1-201ENST00000282841 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
GGPS1-201ENST00000282841 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
GGPS1-201ENST00000282841 USP6P35125 1406 aa14.48□□□□□ -0.09
GGPS1-201ENST00000282841 SHPRHQ149N8 1683 aa14.48□□□□□ -0.09
GGPS1-201ENST00000282841 CHD2O14647 1828 aaKnown RBP14.48□□□□□ -0.09
GGPS1-201ENST00000282841 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
GGPS1-201ENST00000282841 NLRP6P59044 892 aa14.47□□□□□ -0.09
GGPS1-201ENST00000282841 PIK3R4Q99570 1358 aa14.47□□□□□ -0.09
GGPS1-201ENST00000282841 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
GGPS1-201ENST00000282841 PHF8Q9UPP1 1060 aa14.47□□□□□ -0.09
GGPS1-201ENST00000282841 MAP2P11137 1827 aaKnown RBP14.46□□□□□ -0.09
GGPS1-201ENST00000282841 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
GGPS1-201ENST00000282841 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
GGPS1-201ENST00000282841 ADGRB2O60241 1585 aa14.46□□□□□ -0.09
GGPS1-201ENST00000282841 GOLGA2Q08379 1002 aa14.46□□□□□ -0.1
GGPS1-201ENST00000282841 RCAN3Q9UKA8 241 aa14.46□□□□□ -0.1
GGPS1-201ENST00000282841 NALCNQ8IZF0 1738 aa14.46□□□□□ -0.1
GGPS1-201ENST00000282841 ITSN1Q15811 1721 aa14.45□□□□□ -0.1
GGPS1-201ENST00000282841 WWC1Q8IX03 1113 aa14.45□□□□□ -0.1
GGPS1-201ENST00000282841 PSME1Q06323 249 aa14.44□□□□□ -0.1
GGPS1-201ENST00000282841 ZNF521Q96K83 1311 aa14.44□□□□□ -0.1
GGPS1-201ENST00000282841 DUSP27Q5VZP5 1158 aa14.44□□□□□ -0.1
GGPS1-201ENST00000282841 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
GGPS1-201ENST00000282841 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
GGPS1-201ENST00000282841 PRKAR2BP31323 418 aa14.43□□□□□ -0.1
GGPS1-201ENST00000282841 AEBP1Q8IUX7 1158 aa14.43□□□□□ -0.1
GGPS1-201ENST00000282841 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
GGPS1-201ENST00000282841 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
GGPS1-201ENST00000282841 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
GGPS1-201ENST00000282841 COL3A1P02461 1466 aaPredicted RBP14.43□□□□□ -0.1
GGPS1-201ENST00000282841 TOPAZ1Q8N9V7 1692 aa14.42□□□□□ -0.1
GGPS1-201ENST00000282841 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
GGPS1-201ENST00000282841 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
GGPS1-201ENST00000282841 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
GGPS1-201ENST00000282841 SLFN5Q08AF3 891 aa14.41□□□□□ -0.1
GGPS1-201ENST00000282841 PLEKHF1Q96S99 279 aa14.41□□□□□ -0.1
GGPS1-201ENST00000282841 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
GGPS1-201ENST00000282841 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
GGPS1-201ENST00000282841 IL13P35225 146 aa14.41□□□□□ -0.1
GGPS1-201ENST00000282841 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
GGPS1-201ENST00000282841 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
GGPS1-201ENST00000282841 MAPK8IP3Q9UPT6 1336 aa14.4□□□□□ -0.1
GGPS1-201ENST00000282841 PNPLA6Q8IY17 1366 aa14.4□□□□□ -0.1
GGPS1-201ENST00000282841 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
GGPS1-201ENST00000282841 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
GGPS1-201ENST00000282841 RIPK4P57078 832 aa14.39□□□□□ -0.11
GGPS1-201ENST00000282841 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
GGPS1-201ENST00000282841 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
GGPS1-201ENST00000282841 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
GGPS1-201ENST00000282841 C20orf194Q5TEA3 1177 aa14.39□□□□□ -0.11
GGPS1-201ENST00000282841 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 AMPHP49418 695 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 C19orf44Q9H6X5 657 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 ATF3P18847 181 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 RRP1P56182 461 aaKnown RBP14.38□□□□□ -0.11
GGPS1-201ENST00000282841 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 LAS1LQ9Y4W2 734 aaKnown RBP14.38□□□□□ -0.11
GGPS1-201ENST00000282841 INSRP06213 1382 aa14.38□□□□□ -0.11
GGPS1-201ENST00000282841 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
GGPS1-201ENST00000282841 BCAR3O75815 825 aa14.37□□□□□ -0.11
GGPS1-201ENST00000282841 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
GGPS1-201ENST00000282841 TRIM35Q9UPQ4 493 aa14.37□□□□□ -0.11
GGPS1-201ENST00000282841 DCTN1Q14203 1278 aa14.36□□□□□ -0.11
GGPS1-201ENST00000282841 NRKQ7Z2Y5 1582 aa14.36□□□□□ -0.11
GGPS1-201ENST00000282841 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
GGPS1-201ENST00000282841 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms