RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
BCCIP-201ENST00000278100 PSME1Q06323 249 aa16.72■□□□□ 0.27
BCCIP-201ENST00000278100 VPS72Q15906 364 aa16.72■□□□□ 0.27
BCCIP-201ENST00000278100 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
BCCIP-201ENST00000278100 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
BCCIP-201ENST00000278100 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
BCCIP-201ENST00000278100 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
BCCIP-201ENST00000278100 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
BCCIP-201ENST00000278100 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
BCCIP-201ENST00000278100 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
BCCIP-201ENST00000278100 NRAPQ86VF7 1730 aa16.68■□□□□ 0.26
BCCIP-201ENST00000278100 ARHGEF10O15013 1369 aa16.68■□□□□ 0.26
BCCIP-201ENST00000278100 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
BCCIP-201ENST00000278100 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
BCCIP-201ENST00000278100 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
BCCIP-201ENST00000278100 POGKQ9P215 609 aa16.67■□□□□ 0.26
BCCIP-201ENST00000278100 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
BCCIP-201ENST00000278100 TRPM3Q9HCF6 1732 aaPredicted RBP16.66■□□□□ 0.26
BCCIP-201ENST00000278100 LRP5O75197 1615 aa16.66■□□□□ 0.26
BCCIP-201ENST00000278100 FAM182BQ5T319 152 aa16.65■□□□□ 0.26
BCCIP-201ENST00000278100 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
BCCIP-201ENST00000278100 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
BCCIP-201ENST00000278100 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
BCCIP-201ENST00000278100 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
BCCIP-201ENST00000278100 ALS2Q96Q42 1657 aa16.63■□□□□ 0.25
BCCIP-201ENST00000278100 ONECUT3O60422 494 aaPredicted RBP16.63■□□□□ 0.25
BCCIP-201ENST00000278100 BAG6P46379 1132 aa16.63■□□□□ 0.25
BCCIP-201ENST00000278100 COL14A1Q05707 1796 aaKnown RBP16.63■□□□□ 0.25
BCCIP-201ENST00000278100 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
BCCIP-201ENST00000278100 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
BCCIP-201ENST00000278100 ANKARQ7Z5J8 1434 aa16.62■□□□□ 0.25
BCCIP-201ENST00000278100 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
BCCIP-201ENST00000278100 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
BCCIP-201ENST00000278100 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
BCCIP-201ENST00000278100 EN1Q05925 392 aaPredicted RBP16.61■□□□□ 0.25
BCCIP-201ENST00000278100 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
BCCIP-201ENST00000278100 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
BCCIP-201ENST00000278100 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
BCCIP-201ENST00000278100 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
BCCIP-201ENST00000278100 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
BCCIP-201ENST00000278100 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
BCCIP-201ENST00000278100 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
BCCIP-201ENST00000278100 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
BCCIP-201ENST00000278100 TNS1Q9HBL0 1735 aaKnown RBP16.58■□□□□ 0.24
BCCIP-201ENST00000278100 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
BCCIP-201ENST00000278100 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
BCCIP-201ENST00000278100 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
BCCIP-201ENST00000278100 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
BCCIP-201ENST00000278100 R3HDM1Q15032 1099 aaKnown RBP16.56■□□□□ 0.24
BCCIP-201ENST00000278100 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
BCCIP-201ENST00000278100 PRDM11Q9NQV5 511 aa16.56■□□□□ 0.24
BCCIP-201ENST00000278100 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
BCCIP-201ENST00000278100 WASLO00401 505 aaPredicted RBP16.54■□□□□ 0.24
BCCIP-201ENST00000278100 CHRNA2Q15822 529 aa16.54■□□□□ 0.24
BCCIP-201ENST00000278100 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
BCCIP-201ENST00000278100 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
BCCIP-201ENST00000278100 HAX1O00165 279 aa16.53■□□□□ 0.24
BCCIP-201ENST00000278100 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
BCCIP-201ENST00000278100 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
BCCIP-201ENST00000278100 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
BCCIP-201ENST00000278100 KIAA0232Q92628 1395 aa16.52■□□□□ 0.24
BCCIP-201ENST00000278100 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
BCCIP-201ENST00000278100 TRIM37O94972 964 aa16.51■□□□□ 0.23
BCCIP-201ENST00000278100 USP35Q9P2H5 1018 aa16.51■□□□□ 0.23
BCCIP-201ENST00000278100 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
BCCIP-201ENST00000278100 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
BCCIP-201ENST00000278100 ATP7BP35670 1465 aa16.49■□□□□ 0.23
BCCIP-201ENST00000278100 DISP2A7MBM2 1401 aa16.48■□□□□ 0.23
BCCIP-201ENST00000278100 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
BCCIP-201ENST00000278100 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
BCCIP-201ENST00000278100 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
BCCIP-201ENST00000278100 APBA3O96018 575 aa16.47■□□□□ 0.23
BCCIP-201ENST00000278100 EVA1CP58658 441 aa16.45■□□□□ 0.22
BCCIP-201ENST00000278100 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
BCCIP-201ENST00000278100 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
BCCIP-201ENST00000278100 TOPAZ1Q8N9V7 1692 aa16.44■□□□□ 0.22
BCCIP-201ENST00000278100 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
BCCIP-201ENST00000278100 CDK19Q9BWU1 502 aa16.44■□□□□ 0.22
BCCIP-201ENST00000278100 NUP188Q5SRE5 1749 aa16.44■□□□□ 0.22
BCCIP-201ENST00000278100 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
BCCIP-201ENST00000278100 RREB1Q92766 1687 aa16.43■□□□□ 0.22
BCCIP-201ENST00000278100 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
BCCIP-201ENST00000278100 LARP1Q6PKG0 1096 aaKnown RBP16.42■□□□□ 0.22
BCCIP-201ENST00000278100 ACEP12821 1306 aa16.42■□□□□ 0.22
BCCIP-201ENST00000278100 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
BCCIP-201ENST00000278100 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
BCCIP-201ENST00000278100 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
BCCIP-201ENST00000278100 CCER1Q8TC90 406 aaPredicted RBP16.4■□□□□ 0.22
BCCIP-201ENST00000278100 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
BCCIP-201ENST00000278100 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
BCCIP-201ENST00000278100 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
BCCIP-201ENST00000278100 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
BCCIP-201ENST00000278100 POLA2Q14181 598 aa16.38■□□□□ 0.21
BCCIP-201ENST00000278100 BARGINQ6ZT62 677 aa16.38■□□□□ 0.21
BCCIP-201ENST00000278100 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
BCCIP-201ENST00000278100 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
BCCIP-201ENST00000278100 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
BCCIP-201ENST00000278100 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
BCCIP-201ENST00000278100 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
BCCIP-201ENST00000278100 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms