RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 WASHC4Q2M389 1173 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 NEK4P51957 841 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 CCAR1Q8IX12 1150 aaKnown RBP10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 STIM1Q13586 685 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 DHX37Q8IY37 1157 aaKnown RBP10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 ESPNB1AK53 854 aa10.35□□□□□ -0.75
SCUBE3-201ENST00000274938 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 CLASRPQ8N2M8 674 aaKnown RBP10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 TNMDQ9H2S6 317 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 GIMAP7Q8NHV1 300 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 KRI1Q8N9T8 703 aaKnown RBP10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 MIA2Q96PC5 1412 aa10.34□□□□□ -0.75
SCUBE3-201ENST00000274938 FIBPO43427 364 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 KRT85P78386 507 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 ENOX2Q16206 610 aaKnown RBP10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 K7ELQ4 463 aaPredicted RBP10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 SPC24Q8NBT2 197 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 CEP57L1Q8IYX8 460 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 DYDC1Q8WWB3 177 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
SCUBE3-201ENST00000274938 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 NEUROD6Q96NK8 337 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
SCUBE3-201ENST00000274938 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 TMCO3Q6UWJ1 677 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 ZSCAN31Q96LW9 406 aaPredicted RBP10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 RAPGEF2Q9Y4G8 1499 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 UBXN4Q92575 508 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 MCM3P25205 808 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 CALCOCO1Q9P1Z2 691 aa10.31□□□□□ -0.76
SCUBE3-201ENST00000274938 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 SLC26A8Q96RN1 970 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 KRT18P05783 430 aaKnown RBP10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 ANKRD62A6NC57 917 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 BACH2Q9BYV9 841 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 CCDC148Q8NFR7 591 aa10.3□□□□□ -0.76
SCUBE3-201ENST00000274938 STK11IPQ8N1F8 1099 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 GBP2P32456 591 aaPredicted RBP10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 CCDC30Q5VVM6 783 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 TRIM22Q8IYM9 498 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 MAP9Q49MG5 647 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 NUP62CLQ9H1M0 184 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 CFAP45Q9UL16 551 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 MCM4P33991 863 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 EVA1CP58658 441 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 WWC2Q6AWC2 1192 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 TAF4BQ92750 862 aa10.29□□□□□ -0.76
SCUBE3-201ENST00000274938 TAX1BP1Q86VP1 789 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 NOL7Q9UMY1 257 aaKnown RBP10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 MICALCLQ6ZW33 695 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 ZNF526Q8TF50 670 aaPredicted RBP10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 NECTIN2Q92692 538 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 CRACR2AQ9BSW2 395 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 PPP6R1Q9UPN7 881 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 ZSCAN12O43309 604 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 CGNQ9P2M7 1197 aaKnown RBP10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 ME1P48163 572 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 PDCL3Q9H2J4 239 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 MINK1Q8N4C8 1332 aaPredicted RBP10.28□□□□□ -0.76
SCUBE3-201ENST00000274938 CDKL5O76039 1030 aa10.27□□□□□ -0.76
SCUBE3-201ENST00000274938 CCDC91Q7Z6B0 441 aa10.27□□□□□ -0.76
SCUBE3-201ENST00000274938 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.76
SCUBE3-201ENST00000274938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.27□□□□□ -0.76
SCUBE3-201ENST00000274938 SRCIN1Q9C0H9 1055 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 DDX11Q96FC9 970 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 EPB41L2O43491 1005 aaKnown RBP10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 CCDC57Q2TAC2 916 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 CCDC88BA6NC98 1476 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 ARHGAP29Q52LW3 1261 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
SCUBE3-201ENST00000274938 SCAPERQ9BY12 1400 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 NUTM2FA1L443 756 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 GNAI2P04899 355 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms