RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ZSCAN23Q3MJ62 389 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 CAVIN1Q6NZI2 390 aaKnown RBP11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 POGZQ7Z3K3 1410 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 GGT6Q6P531 493 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
HMGCLL1-201ENST00000274901 ANP32BQ92688 251 aaKnown RBP11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 CCDC94Q9BW85 323 aaPredicted RBP11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 KANK1Q14678 1352 aa11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 NPC1L1Q9UHC9 1359 aa11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
HMGCLL1-201ENST00000274901 PKP1Q13835 747 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 CHAMP1Q96JM3 812 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 PHF23Q9BUL5 403 aaPredicted RBP11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 MCTP1Q6DN14 999 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 SASS6Q6UVJ0 657 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
HMGCLL1-201ENST00000274901 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
HMGCLL1-201ENST00000274901 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
HMGCLL1-201ENST00000274901 DZIP1LQ8IYY4 767 aaKnown RBP11.41□□□□□ -0.58
HMGCLL1-201ENST00000274901 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
HMGCLL1-201ENST00000274901 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
HMGCLL1-201ENST00000274901 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
HMGCLL1-201ENST00000274901 PTMSP20962 102 aa11.4□□□□□ -0.58
HMGCLL1-201ENST00000274901 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
HMGCLL1-201ENST00000274901 CEP152O94986 1710 aa11.4□□□□□ -0.58
HMGCLL1-201ENST00000274901 MADDQ8WXG6 1647 aa11.4□□□□□ -0.58
HMGCLL1-201ENST00000274901 ATP10AO60312 1499 aa11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 FAM177BA6PVY3 158 aa11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 TRIM27P14373 513 aa11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 MTERF4Q7Z6M4 381 aaKnown RBP11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 NGEFQ8N5V2 710 aa11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 GPT2Q8TD30 523 aa11.4□□□□□ -0.59
HMGCLL1-201ENST00000274901 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
HMGCLL1-201ENST00000274901 NEO1Q92859 1461 aa11.39□□□□□ -0.59
HMGCLL1-201ENST00000274901 ATP2B3Q16720 1220 aa11.39□□□□□ -0.59
HMGCLL1-201ENST00000274901 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
HMGCLL1-201ENST00000274901 CBX1P83916 185 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 TSPOAP1O95153 1857 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 HECW2Q9P2P5 1572 aa11.38□□□□□ -0.59
HMGCLL1-201ENST00000274901 GOLGA6L22H0YM25 854 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 NUCB1Q02818 461 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 MAP3K4Q9Y6R4 1608 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 ABCA6Q8N139 1617 aa11.37□□□□□ -0.59
HMGCLL1-201ENST00000274901 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 PDE4CQ08493 712 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 MPNDQ8N594 471 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 FRMPD1Q5SYB0 1578 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 TET3O43151 1660 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 VWDEQ8N2E2 1590 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 SCAF11Q99590 1463 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 TMEM63CQ9P1W3 806 aa11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 KDM5AP29375 1690 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 CFAP65Q6ZU64 1925 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-201ENST00000274901 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 RNF214Q8ND24 703 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 PTPRTO14522 1441 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 SYCE3A1L190 88 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 PRPF40AO75400 957 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
HMGCLL1-201ENST00000274901 TRPM2O94759 1503 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 MCM5P33992 734 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 CHD1LQ86WJ1 897 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 ZBTB40Q9NUA8 1239 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
HMGCLL1-201ENST00000274901 SPHKAPQ2M3C7 1700 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms