RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 PHACTR3Q96KR7 559 aa14□□□□□ -0.17
SKP2-202ENST00000274255 ATP10BO94823 1461 aa14□□□□□ -0.17
SKP2-202ENST00000274255 PKP1Q13835 747 aa14□□□□□ -0.17
SKP2-202ENST00000274255 SPC24Q8NBT2 197 aa14□□□□□ -0.17
SKP2-202ENST00000274255 CDK19Q9BWU1 502 aa14□□□□□ -0.17
SKP2-202ENST00000274255 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
SKP2-202ENST00000274255 A0A0U1RQG5 324 aaPredicted RBP13.99□□□□□ -0.17
SKP2-202ENST00000274255 A2MP01023 1474 aa13.99□□□□□ -0.17
SKP2-202ENST00000274255 FIBPO43427 364 aa13.99□□□□□ -0.17
SKP2-202ENST00000274255 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
SKP2-202ENST00000274255 NME9Q86XW9 330 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
SKP2-202ENST00000274255 PPFIA3O75145 1194 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 STK31Q9BXU1 1019 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 SYNJ2O15056 1496 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 MCCP23508 829 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 COG3Q96JB2 828 aa13.98□□□□□ -0.17
SKP2-202ENST00000274255 CHMP4BQ9H444 224 aaKnown RBP13.97□□□□□ -0.17
SKP2-202ENST00000274255 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
SKP2-202ENST00000274255 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
SKP2-202ENST00000274255 TSC1Q92574 1164 aa13.97□□□□□ -0.17
SKP2-202ENST00000274255 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
SKP2-202ENST00000274255 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
SKP2-202ENST00000274255 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.17
SKP2-202ENST00000274255 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
SKP2-202ENST00000274255 AMPHP49418 695 aa13.96□□□□□ -0.17
SKP2-202ENST00000274255 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.17
SKP2-202ENST00000274255 WDR62O43379 1518 aa13.95□□□□□ -0.18
SKP2-202ENST00000274255 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
SKP2-202ENST00000274255 NPHP1O15259 732 aa13.95□□□□□ -0.18
SKP2-202ENST00000274255 GNAI1P63096 354 aa13.95□□□□□ -0.18
SKP2-202ENST00000274255 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
SKP2-202ENST00000274255 KIF14Q15058 1648 aa13.95□□□□□ -0.18
SKP2-202ENST00000274255 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 KDM4AO75164 1064 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 UQCRHLA0A096LP55 91 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 IGSF3O75054 1194 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 UQCRHP07919 91 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
SKP2-202ENST00000274255 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
SKP2-202ENST00000274255 API5Q9BZZ5 524 aaKnown RBP13.94□□□□□ -0.18
SKP2-202ENST00000274255 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
SKP2-202ENST00000274255 NOS1P29475 1434 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 FYB1O15117 783 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
SKP2-202ENST00000274255 HMMRO75330 724 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
SKP2-202ENST00000274255 RBM33Q96EV2 1170 aaKnown RBP13.93□□□□□ -0.18
SKP2-202ENST00000274255 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 IDI1Q13907 227 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 C17orf53Q8N3J3 647 aaPredicted RBP13.93□□□□□ -0.18
SKP2-202ENST00000274255 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
SKP2-202ENST00000274255 NUCB2P80303 420 aa13.92□□□□□ -0.18
SKP2-202ENST00000274255 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
SKP2-202ENST00000274255 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
SKP2-202ENST00000274255 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
SKP2-202ENST00000274255 REC8O95072 547 aa13.92□□□□□ -0.18
SKP2-202ENST00000274255 CLCN1P35523 988 aa13.92□□□□□ -0.18
SKP2-202ENST00000274255 MEIS3Q99687 375 aa13.92□□□□□ -0.18
SKP2-202ENST00000274255 ZBTB9Q96C00 473 aa13.91□□□□□ -0.18
SKP2-202ENST00000274255 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
SKP2-202ENST00000274255 ZHX1Q9UKY1 873 aaPredicted RBP13.91□□□□□ -0.18
SKP2-202ENST00000274255 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
SKP2-202ENST00000274255 CFAP65Q6ZU64 1925 aaKnown RBP13.91□□□□□ -0.18
SKP2-202ENST00000274255 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
SKP2-202ENST00000274255 SURF6O75683 361 aaKnown RBP13.91□□□□□ -0.18
SKP2-202ENST00000274255 NUCB1Q02818 461 aa13.91□□□□□ -0.18
SKP2-202ENST00000274255 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 ANXA1P04083 346 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 ZSCAN30Q86W11 494 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
SKP2-202ENST00000274255 KDM5CP41229 1560 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
SKP2-202ENST00000274255 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.18
SKP2-202ENST00000274255 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.19
SKP2-202ENST00000274255 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.19
SKP2-202ENST00000274255 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 STK3Q13188 491 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 GCC1Q96CN9 775 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 ZMYM4Q5VZL5 1548 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 DNMT1P26358 1616 aaKnown RBP13.89□□□□□ -0.19
SKP2-202ENST00000274255 RABEP1Q15276 862 aa13.89□□□□□ -0.19
SKP2-202ENST00000274255 SDSP20132 328 aa13.88□□□□□ -0.19
SKP2-202ENST00000274255 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
SKP2-202ENST00000274255 ASXL1Q8IXJ9 1541 aa13.88□□□□□ -0.19
SKP2-202ENST00000274255 CAMK4Q16566 473 aa13.88□□□□□ -0.19
SKP2-202ENST00000274255 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
SKP2-202ENST00000274255 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
SKP2-202ENST00000274255 TRMT2AQ8IZ69 625 aaKnown RBP13.87□□□□□ -0.19
SKP2-202ENST00000274255 FOXO3O43524 673 aa13.87□□□□□ -0.19
SKP2-202ENST00000274255 CPA1P15085 419 aa13.87□□□□□ -0.19
SKP2-202ENST00000274255 RBSNQ9H1K0 784 aa13.87□□□□□ -0.19
SKP2-202ENST00000274255 RAPGEF6Q8TEU7 1601 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms