RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MAPK8IP3Q9UPT6 1336 aa19.73■□□□□ 0.75
CTDSP1-201ENST00000273062 PPLO60437 1756 aa19.73■□□□□ 0.75
CTDSP1-201ENST00000273062 ZBTB22O15209 634 aa19.72■□□□□ 0.75
CTDSP1-201ENST00000273062 TNPO1Q92973 898 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-201ENST00000273062 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
CTDSP1-201ENST00000273062 TAF7LQ5H9L4 462 aa19.72■□□□□ 0.75
CTDSP1-201ENST00000273062 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
CTDSP1-201ENST00000273062 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
CTDSP1-201ENST00000273062 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
CTDSP1-201ENST00000273062 CBX1P83916 185 aa19.71■□□□□ 0.75
CTDSP1-201ENST00000273062 TSC1Q92574 1164 aa19.71■□□□□ 0.75
CTDSP1-201ENST00000273062 ADAMTS8Q9UP79 889 aa19.71■□□□□ 0.75
CTDSP1-201ENST00000273062 TSPOAP1O95153 1857 aa19.7■□□□□ 0.74
CTDSP1-201ENST00000273062 MTERF4Q7Z6M4 381 aaKnown RBP19.7■□□□□ 0.74
CTDSP1-201ENST00000273062 C14orf93Q9H972 538 aaKnown RBP19.7■□□□□ 0.74
CTDSP1-201ENST00000273062 IDI1Q13907 227 aa19.69■□□□□ 0.74
CTDSP1-201ENST00000273062 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
CTDSP1-201ENST00000273062 GLI2P10070 1586 aa19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 ADGRB1O14514 1584 aa19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 ASXL1Q8IXJ9 1541 aa19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 SPINK5Q9NQ38 1064 aaPredicted RBP19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
CTDSP1-201ENST00000273062 ZNF500O60304 480 aaPredicted RBP19.67■□□□□ 0.74
CTDSP1-201ENST00000273062 DDIT3P35638 169 aa19.67■□□□□ 0.74
CTDSP1-201ENST00000273062 NOL7Q9UMY1 257 aaKnown RBP19.67■□□□□ 0.74
CTDSP1-201ENST00000273062 PIK3C2BO00750 1634 aa19.66■□□□□ 0.74
CTDSP1-201ENST00000273062 FBXO31Q5XUX0 539 aaPredicted RBP19.66■□□□□ 0.74
CTDSP1-201ENST00000273062 MFAP1P55081 439 aaKnown RBP19.65■□□□□ 0.74
CTDSP1-201ENST00000273062 SETBP1Q9Y6X0 1596 aa19.65■□□□□ 0.74
CTDSP1-201ENST00000273062 IGSF3O75054 1194 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 PANK1Q8TE04 598 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 COG6Q9Y2V7 657 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 MYO3AQ8NEV4 1616 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 NEXMIFQ5QGS0 1516 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 C22orf23Q9BZE7 217 aa19.64■□□□□ 0.73
CTDSP1-201ENST00000273062 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 GOLGA2Q08379 1002 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 ATP2B3Q16720 1220 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 ZNF521Q96K83 1311 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 KIF20AO95235 890 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 ZNF710Q8N1W2 664 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
CTDSP1-201ENST00000273062 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-201ENST00000273062 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-201ENST00000273062 ARHGAP31Q2M1Z3 1444 aa19.62■□□□□ 0.73
CTDSP1-201ENST00000273062 SAFB2Q14151 953 aaKnown RBP eCLIP19.61■□□□□ 0.73
CTDSP1-201ENST00000273062 QRICH2Q9H0J4 1663 aa19.61■□□□□ 0.73
CTDSP1-201ENST00000273062 SASS6Q6UVJ0 657 aa19.61■□□□□ 0.73
CTDSP1-201ENST00000273062 SLC12A5Q9H2X9 1139 aa19.61■□□□□ 0.73
CTDSP1-201ENST00000273062 GTPBP4Q9BZE4 634 aaKnown RBP19.6■□□□□ 0.73
CTDSP1-201ENST00000273062 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
CTDSP1-201ENST00000273062 FAM177BA6PVY3 158 aa19.6■□□□□ 0.73
CTDSP1-201ENST00000273062 HSCBQ8IWL3 235 aa19.6■□□□□ 0.73
CTDSP1-201ENST00000273062 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
CTDSP1-201ENST00000273062 SLFN5Q08AF3 891 aa19.59■□□□□ 0.73
CTDSP1-201ENST00000273062 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
CTDSP1-201ENST00000273062 MYO5BQ9ULV0 1848 aa19.59■□□□□ 0.73
CTDSP1-201ENST00000273062 SBNO2Q9Y2G9 1366 aa19.59■□□□□ 0.73
CTDSP1-201ENST00000273062 NCOA3Q9Y6Q9 1424 aa19.59■□□□□ 0.73
CTDSP1-201ENST00000273062 VGFO15240 615 aaPredicted RBP19.58■□□□□ 0.73
CTDSP1-201ENST00000273062 MLECQ14165 292 aa19.58■□□□□ 0.72
CTDSP1-201ENST00000273062 WDR43Q15061 677 aaKnown RBP eCLIP19.58■□□□□ 0.72
CTDSP1-201ENST00000273062 STK26Q9P289 416 aa19.58■□□□□ 0.72
CTDSP1-201ENST00000273062 PREX1Q8TCU6 1659 aa19.58■□□□□ 0.72
CTDSP1-201ENST00000273062 ZKSCAN5Q9Y2L8 839 aa19.57■□□□□ 0.72
CTDSP1-201ENST00000273062 LETM1O95202 739 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-201ENST00000273062 RAB3GAP1Q15042 981 aa19.57■□□□□ 0.72
CTDSP1-201ENST00000273062 GBP4Q96PP9 640 aa19.57■□□□□ 0.72
CTDSP1-201ENST00000273062 PCDHB15Q9Y5E8 787 aa19.57■□□□□ 0.72
CTDSP1-201ENST00000273062 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
CTDSP1-201ENST00000273062 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
CTDSP1-201ENST00000273062 INSRP06213 1382 aa19.56■□□□□ 0.72
CTDSP1-201ENST00000273062 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
CTDSP1-201ENST00000273062 SKOR2Q2VWA4 1001 aaPredicted RBP19.56■□□□□ 0.72
CTDSP1-201ENST00000273062 SPDYE4A6NLX3 237 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 RBSNQ9H1K0 784 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 HS1BP3Q53T59 392 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 SLC52A1Q9NWF4 448 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
CTDSP1-201ENST00000273062 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
CTDSP1-201ENST00000273062 CGNL1Q0VF96 1302 aa19.53■□□□□ 0.72
CTDSP1-201ENST00000273062 ARHGEF28Q8N1W1 1705 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-201ENST00000273062 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
CTDSP1-201ENST00000273062 TNNQ9UQP3 1299 aa19.53■□□□□ 0.72
CTDSP1-201ENST00000273062 DDX49Q9Y6V7 483 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-201ENST00000273062 SSFA2P28290 1259 aa19.52■□□□□ 0.72
CTDSP1-201ENST00000273062 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
CTDSP1-201ENST00000273062 CSPP1Q1MSJ5 1256 aa19.52■□□□□ 0.71
CTDSP1-201ENST00000273062 TRMT2AQ8IZ69 625 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-201ENST00000273062 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
CTDSP1-201ENST00000273062 CD2BP2O95400 341 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-201ENST00000273062 MYRIPQ8NFW9 859 aa19.49■□□□□ 0.71
CTDSP1-201ENST00000273062 NKTRP30414 1462 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-201ENST00000273062 KLHL40Q2TBA0 621 aa19.48■□□□□ 0.71
CTDSP1-201ENST00000273062 CAVIN1Q6NZI2 390 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-201ENST00000273062 CLTCQ00610 1675 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms