RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
CPNE9-201ENST00000273027 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
CPNE9-201ENST00000273027 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
CPNE9-201ENST00000273027 MST1RQ04912 1400 aa13.22□□□□□ -0.29
CPNE9-201ENST00000273027 PPLO60437 1756 aa13.22□□□□□ -0.29
CPNE9-201ENST00000273027 DCCP43146 1447 aa13.22□□□□□ -0.29
CPNE9-201ENST00000273027 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
CPNE9-201ENST00000273027 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
CPNE9-201ENST00000273027 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
CPNE9-201ENST00000273027 XRN1Q8IZH2 1706 aaKnown RBP13.21□□□□□ -0.3
CPNE9-201ENST00000273027 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
CPNE9-201ENST00000273027 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
CPNE9-201ENST00000273027 AAMPQ13685 434 aa13.2□□□□□ -0.3
CPNE9-201ENST00000273027 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
CPNE9-201ENST00000273027 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
CPNE9-201ENST00000273027 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
CPNE9-201ENST00000273027 NHSL1Q5SYE7 1610 aa13.18□□□□□ -0.3
CPNE9-201ENST00000273027 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
CPNE9-201ENST00000273027 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
CPNE9-201ENST00000273027 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
CPNE9-201ENST00000273027 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
CPNE9-201ENST00000273027 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
CPNE9-201ENST00000273027 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
CPNE9-201ENST00000273027 METP08581 1390 aa13.17□□□□□ -0.3
CPNE9-201ENST00000273027 NSD2O96028 1365 aa13.16□□□□□ -0.3
CPNE9-201ENST00000273027 E9PSI1 815 aa13.15□□□□□ -0.3
CPNE9-201ENST00000273027 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
CPNE9-201ENST00000273027 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
CPNE9-201ENST00000273027 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
CPNE9-201ENST00000273027 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.31
CPNE9-201ENST00000273027 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
CPNE9-201ENST00000273027 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
CPNE9-201ENST00000273027 C14orf93Q9H972 538 aaKnown RBP13.14□□□□□ -0.31
CPNE9-201ENST00000273027 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
CPNE9-201ENST00000273027 ATRNO75882 1429 aa13.13□□□□□ -0.31
CPNE9-201ENST00000273027 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
CPNE9-201ENST00000273027 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
CPNE9-201ENST00000273027 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
CPNE9-201ENST00000273027 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
CPNE9-201ENST00000273027 EP400Q96L91 3159 aa13.12□□□□□ -0.31
CPNE9-201ENST00000273027 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CPNE9-201ENST00000273027 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
CPNE9-201ENST00000273027 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
CPNE9-201ENST00000273027 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
CPNE9-201ENST00000273027 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
CPNE9-201ENST00000273027 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
CPNE9-201ENST00000273027 PDE4AP27815 886 aa13.11□□□□□ -0.31
CPNE9-201ENST00000273027 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
CPNE9-201ENST00000273027 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
CPNE9-201ENST00000273027 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
CPNE9-201ENST00000273027 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
CPNE9-201ENST00000273027 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
CPNE9-201ENST00000273027 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
CPNE9-201ENST00000273027 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
CPNE9-201ENST00000273027 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
CPNE9-201ENST00000273027 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
CPNE9-201ENST00000273027 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
CPNE9-201ENST00000273027 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
CPNE9-201ENST00000273027 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
CPNE9-201ENST00000273027 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
CPNE9-201ENST00000273027 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
CPNE9-201ENST00000273027 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
CPNE9-201ENST00000273027 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
CPNE9-201ENST00000273027 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
CPNE9-201ENST00000273027 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
CPNE9-201ENST00000273027 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
CPNE9-201ENST00000273027 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
CPNE9-201ENST00000273027 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
CPNE9-201ENST00000273027 FOXO3O43524 673 aa13.06□□□□□ -0.32
CPNE9-201ENST00000273027 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
CPNE9-201ENST00000273027 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
CPNE9-201ENST00000273027 UNC5CLQ8IV45 518 aa13.05□□□□□ -0.32
CPNE9-201ENST00000273027 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
CPNE9-201ENST00000273027 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
CPNE9-201ENST00000273027 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
CPNE9-201ENST00000273027 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
CPNE9-201ENST00000273027 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
CPNE9-201ENST00000273027 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
CPNE9-201ENST00000273027 MORC1Q86VD1 984 aa13.03□□□□□ -0.32
CPNE9-201ENST00000273027 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
CPNE9-201ENST00000273027 NSD3Q9BZ95 1437 aa13.03□□□□□ -0.32
CPNE9-201ENST00000273027 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
CPNE9-201ENST00000273027 APAF1O14727 1248 aa13.02□□□□□ -0.33
CPNE9-201ENST00000273027 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
CPNE9-201ENST00000273027 PNNQ9H307 717 aaKnown RBP13.02□□□□□ -0.33
CPNE9-201ENST00000273027 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
CPNE9-201ENST00000273027 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
CPNE9-201ENST00000273027 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
CPNE9-201ENST00000273027 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
CPNE9-201ENST00000273027 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
CPNE9-201ENST00000273027 PLIN1O60240 522 aa13□□□□□ -0.33
CPNE9-201ENST00000273027 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
CPNE9-201ENST00000273027 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
CPNE9-201ENST00000273027 KRT27Q7Z3Y8 459 aa12.99□□□□□ -0.33
CPNE9-201ENST00000273027 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
CPNE9-201ENST00000273027 PMFBP1Q8TBY8 1022 aa12.99□□□□□ -0.33
CPNE9-201ENST00000273027 A0A0G2JS52 829 aa12.98□□□□□ -0.33
CPNE9-201ENST00000273027 BAG6P46379 1132 aa12.98□□□□□ -0.33
CPNE9-201ENST00000273027 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
CPNE9-201ENST00000273027 MARF1Q9Y4F3 1742 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms