RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
SDE2-201ENST00000272091 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
SDE2-201ENST00000272091 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
SDE2-201ENST00000272091 ANKARQ7Z5J8 1434 aa16.16■□□□□ 0.18
SDE2-201ENST00000272091 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
SDE2-201ENST00000272091 FBLN1P23142 703 aa16.15■□□□□ 0.18
SDE2-201ENST00000272091 PNPLA6Q8IY17 1366 aa16.15■□□□□ 0.18
SDE2-201ENST00000272091 FKBP8Q14318 412 aa16.15■□□□□ 0.18
SDE2-201ENST00000272091 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
SDE2-201ENST00000272091 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
SDE2-201ENST00000272091 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
SDE2-201ENST00000272091 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
SDE2-201ENST00000272091 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
SDE2-201ENST00000272091 PIK3C2AO00443 1686 aa16.13■□□□□ 0.17
SDE2-201ENST00000272091 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
SDE2-201ENST00000272091 OVOS2A0A0J9YW53 1432 aa16.12■□□□□ 0.17
SDE2-201ENST00000272091 OVOS2Q6IE36 1432 aa16.12■□□□□ 0.17
SDE2-201ENST00000272091 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
SDE2-201ENST00000272091 PDE3BQ13370 1112 aa16.11■□□□□ 0.17
SDE2-201ENST00000272091 LMTK3Q96Q04 1460 aa16.11■□□□□ 0.17
SDE2-201ENST00000272091 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
SDE2-201ENST00000272091 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
SDE2-201ENST00000272091 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
SDE2-201ENST00000272091 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
SDE2-201ENST00000272091 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
SDE2-201ENST00000272091 APAF1O14727 1248 aa16.1■□□□□ 0.17
SDE2-201ENST00000272091 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
SDE2-201ENST00000272091 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
SDE2-201ENST00000272091 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
SDE2-201ENST00000272091 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
SDE2-201ENST00000272091 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
SDE2-201ENST00000272091 HSPA2P54652 639 aa16.07■□□□□ 0.16
SDE2-201ENST00000272091 COG3Q96JB2 828 aa16.06■□□□□ 0.16
SDE2-201ENST00000272091 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
SDE2-201ENST00000272091 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
SDE2-201ENST00000272091 USP31Q70CQ4 1352 aa16.06■□□□□ 0.16
SDE2-201ENST00000272091 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
SDE2-201ENST00000272091 NEFLP07196 543 aa16.05■□□□□ 0.16
SDE2-201ENST00000272091 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
SDE2-201ENST00000272091 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
SDE2-201ENST00000272091 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
SDE2-201ENST00000272091 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
SDE2-201ENST00000272091 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
SDE2-201ENST00000272091 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDE2-201ENST00000272091 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
SDE2-201ENST00000272091 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
SDE2-201ENST00000272091 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
SDE2-201ENST00000272091 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
SDE2-201ENST00000272091 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
SDE2-201ENST00000272091 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
SDE2-201ENST00000272091 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
SDE2-201ENST00000272091 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
SDE2-201ENST00000272091 SLFN5Q08AF3 891 aa16.02■□□□□ 0.15
SDE2-201ENST00000272091 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
SDE2-201ENST00000272091 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
SDE2-201ENST00000272091 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
SDE2-201ENST00000272091 IL13P35225 146 aa16.01■□□□□ 0.15
SDE2-201ENST00000272091 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
SDE2-201ENST00000272091 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
SDE2-201ENST00000272091 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
SDE2-201ENST00000272091 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
SDE2-201ENST00000272091 TRPM3Q9HCF6 1732 aaPredicted RBP15.99■□□□□ 0.15
SDE2-201ENST00000272091 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
SDE2-201ENST00000272091 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
SDE2-201ENST00000272091 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
SDE2-201ENST00000272091 RSPH6AQ9H0K4 717 aa15.98■□□□□ 0.15
SDE2-201ENST00000272091 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
SDE2-201ENST00000272091 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
SDE2-201ENST00000272091 NEUROD2Q15784 382 aa15.96■□□□□ 0.15
SDE2-201ENST00000272091 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
SDE2-201ENST00000272091 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.15
SDE2-201ENST00000272091 ORAI2Q96SN7 254 aa15.96■□□□□ 0.15
SDE2-201ENST00000272091 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
SDE2-201ENST00000272091 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
SDE2-201ENST00000272091 MST1RQ04912 1400 aa15.95■□□□□ 0.14
SDE2-201ENST00000272091 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
SDE2-201ENST00000272091 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
SDE2-201ENST00000272091 LTN1O94822 1766 aa15.95■□□□□ 0.14
SDE2-201ENST00000272091 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 NFAT5O94916 1531 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 FCHSD2O94868 740 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
SDE2-201ENST00000272091 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
SDE2-201ENST00000272091 E9PSI1 815 aa15.93■□□□□ 0.14
SDE2-201ENST00000272091 EIF4A2Q14240 407 aaKnown RBP15.93■□□□□ 0.14
SDE2-201ENST00000272091 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
SDE2-201ENST00000272091 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
SDE2-201ENST00000272091 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
SDE2-201ENST00000272091 DCCP43146 1447 aa15.93■□□□□ 0.14
SDE2-201ENST00000272091 HMOX1P09601 288 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 SOX12O15370 315 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 NLRP6P59044 892 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
SDE2-201ENST00000272091 ALS2Q96Q42 1657 aa15.91■□□□□ 0.14
SDE2-201ENST00000272091 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
SDE2-201ENST00000272091 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms