RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
COPS3-201ENST00000268717 CGNL1Q0VF96 1302 aa20.67■□□□□ 0.9
COPS3-201ENST00000268717 SPATA31A6Q5VVP1 1343 aa20.67■□□□□ 0.9
COPS3-201ENST00000268717 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
COPS3-201ENST00000268717 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
COPS3-201ENST00000268717 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
COPS3-201ENST00000268717 ATP7BP35670 1465 aa20.66■□□□□ 0.9
COPS3-201ENST00000268717 ILDR2Q71H61 639 aa20.65■□□□□ 0.9
COPS3-201ENST00000268717 NPHP3Q7Z494 1330 aa20.65■□□□□ 0.9
COPS3-201ENST00000268717 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
COPS3-201ENST00000268717 CD163L1Q9NR16 1453 aa20.65■□□□□ 0.9
COPS3-201ENST00000268717 LRP6O75581 1613 aa20.64■□□□□ 0.89
COPS3-201ENST00000268717 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
COPS3-201ENST00000268717 PXDNQ92626 1479 aa20.64■□□□□ 0.89
COPS3-201ENST00000268717 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
COPS3-201ENST00000268717 FOXO3O43524 673 aa20.63■□□□□ 0.89
COPS3-201ENST00000268717 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
COPS3-201ENST00000268717 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
COPS3-201ENST00000268717 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
COPS3-201ENST00000268717 GTF3C3Q9Y5Q9 886 aa20.6■□□□□ 0.89
COPS3-201ENST00000268717 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
COPS3-201ENST00000268717 BLMP54132 1417 aaPredicted RBP20.58■□□□□ 0.88
COPS3-201ENST00000268717 COL22A1Q8NFW1 1626 aaPredicted RBP20.57■□□□□ 0.88
COPS3-201ENST00000268717 PRR36Q9H6K5 1346 aa20.57■□□□□ 0.88
COPS3-201ENST00000268717 ITSN1Q15811 1721 aa20.57■□□□□ 0.88
COPS3-201ENST00000268717 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
COPS3-201ENST00000268717 POLR3AO14802 1390 aaPredicted RBP20.57■□□□□ 0.88
COPS3-201ENST00000268717 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
COPS3-201ENST00000268717 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
COPS3-201ENST00000268717 NUTM2BA6NNL0 878 aaPredicted RBP20.56■□□□□ 0.88
COPS3-201ENST00000268717 NUTM2EB1AL46 878 aaPredicted RBP20.56■□□□□ 0.88
COPS3-201ENST00000268717 NUTM2AQ8IVF1 878 aaPredicted RBP20.56■□□□□ 0.88
COPS3-201ENST00000268717 CCDC61Q9Y6R9 512 aa20.56■□□□□ 0.88
COPS3-201ENST00000268717 MEX3CQ5U5Q3 659 aaKnown RBP20.55■□□□□ 0.88
COPS3-201ENST00000268717 PPIP5K1Q6PFW1 1433 aa20.55■□□□□ 0.88
COPS3-201ENST00000268717 NUDT16Q96DE0 195 aaKnown RBP20.54■□□□□ 0.88
COPS3-201ENST00000268717 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
COPS3-201ENST00000268717 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
COPS3-201ENST00000268717 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
COPS3-201ENST00000268717 TOPAZ1Q8N9V7 1692 aa20.52■□□□□ 0.88
COPS3-201ENST00000268717 SPATA31A3Q5VYP0 1347 aa20.51■□□□□ 0.87
COPS3-201ENST00000268717 ANKRD26Q9UPS8 1709 aa20.51■□□□□ 0.87
COPS3-201ENST00000268717 PSME1Q06323 249 aa20.5■□□□□ 0.87
COPS3-201ENST00000268717 TRPM3Q9HCF6 1732 aaPredicted RBP20.49■□□□□ 0.87
COPS3-201ENST00000268717 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
COPS3-201ENST00000268717 ZNF692Q9BU19 519 aaPredicted RBP20.49■□□□□ 0.87
COPS3-201ENST00000268717 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
COPS3-201ENST00000268717 SBNO1A3KN83 1393 aa20.49■□□□□ 0.87
COPS3-201ENST00000268717 FYB1O15117 783 aa20.49■□□□□ 0.87
COPS3-201ENST00000268717 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
COPS3-201ENST00000268717 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
COPS3-201ENST00000268717 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
COPS3-201ENST00000268717 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
COPS3-201ENST00000268717 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
COPS3-201ENST00000268717 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
COPS3-201ENST00000268717 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
COPS3-201ENST00000268717 ADAMTS2O95450 1211 aa20.45■□□□□ 0.86
COPS3-201ENST00000268717 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
COPS3-201ENST00000268717 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
COPS3-201ENST00000268717 C8orf37Q96NL8 207 aa20.45■□□□□ 0.86
COPS3-201ENST00000268717 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
COPS3-201ENST00000268717 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
COPS3-201ENST00000268717 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
COPS3-201ENST00000268717 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
COPS3-201ENST00000268717 SOCS7O14512 581 aa20.43■□□□□ 0.86
COPS3-201ENST00000268717 AFF2P51816 1311 aa20.43■□□□□ 0.86
COPS3-201ENST00000268717 ARHGEF10O15013 1369 aa20.43■□□□□ 0.86
COPS3-201ENST00000268717 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
COPS3-201ENST00000268717 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
COPS3-201ENST00000268717 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
COPS3-201ENST00000268717 MTHFSP49914 203 aa20.4■□□□□ 0.86
COPS3-201ENST00000268717 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
COPS3-201ENST00000268717 NGLY1Q96IV0 654 aa20.4■□□□□ 0.86
COPS3-201ENST00000268717 NRKQ7Z2Y5 1582 aa20.4■□□□□ 0.86
COPS3-201ENST00000268717 ACEP12821 1306 aa20.39■□□□□ 0.86
COPS3-201ENST00000268717 NUDCQ9Y266 331 aa20.39■□□□□ 0.86
COPS3-201ENST00000268717 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
COPS3-201ENST00000268717 USP6P35125 1406 aa20.38■□□□□ 0.85
COPS3-201ENST00000268717 AATKQ6ZMQ8 1374 aa20.38■□□□□ 0.85
COPS3-201ENST00000268717 SSH2Q76I76 1423 aa20.37■□□□□ 0.85
COPS3-201ENST00000268717 CRYBG1Q9Y4K1 1723 aa20.36■□□□□ 0.85
COPS3-201ENST00000268717 FNBP4Q8N3X1 1017 aaPredicted RBP20.36■□□□□ 0.85
COPS3-201ENST00000268717 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
COPS3-201ENST00000268717 COL3A1P02461 1466 aaPredicted RBP20.36■□□□□ 0.85
COPS3-201ENST00000268717 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
COPS3-201ENST00000268717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
COPS3-201ENST00000268717 TTC21BQ7Z4L5 1316 aa20.34■□□□□ 0.85
COPS3-201ENST00000268717 TTC21AQ8NDW8 1320 aa20.34■□□□□ 0.85
COPS3-201ENST00000268717 HAP1P54257 671 aaPredicted RBP20.34■□□□□ 0.85
COPS3-201ENST00000268717 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.84
COPS3-201ENST00000268717 PLEKHG5O94827 1062 aa20.33■□□□□ 0.84
COPS3-201ENST00000268717 NEFLP07196 543 aa20.33■□□□□ 0.84
COPS3-201ENST00000268717 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.84
COPS3-201ENST00000268717 USP21Q9UK80 565 aa20.33■□□□□ 0.84
COPS3-201ENST00000268717 COG3Q96JB2 828 aa20.32■□□□□ 0.84
COPS3-201ENST00000268717 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
COPS3-201ENST00000268717 OVOS2A0A0J9YW53 1432 aa20.32■□□□□ 0.84
COPS3-201ENST00000268717 OVOS2Q6IE36 1432 aa20.32■□□□□ 0.84
COPS3-201ENST00000268717 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.32■□□□□ 0.84
COPS3-201ENST00000268717 RXRBP28702 533 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms