RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 TMEM57Q8N5G2 664 aa21.58■■□□□ 1.05
SPG7-201ENST00000268704 MCM4P33991 863 aa21.57■■□□□ 1.04
SPG7-201ENST00000268704 ATF7IPQ6VMQ6 1270 aa21.57■■□□□ 1.04
SPG7-201ENST00000268704 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
SPG7-201ENST00000268704 SRPK2P78362 688 aaKnown RBP21.57■■□□□ 1.04
SPG7-201ENST00000268704 CAMSAP1Q5T5Y3 1602 aa21.56■■□□□ 1.04
SPG7-201ENST00000268704 PANK2Q9BZ23 570 aa21.56■■□□□ 1.04
SPG7-201ENST00000268704 DDX19BQ9UMR2 479 aa21.55■■□□□ 1.04
SPG7-201ENST00000268704 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
SPG7-201ENST00000268704 HDAC1Q13547 482 aaPredicted RBP21.54■■□□□ 1.04
SPG7-201ENST00000268704 NSD2O96028 1365 aa21.54■■□□□ 1.04
SPG7-201ENST00000268704 XRCC6P12956 609 aaKnown RBP eCLIP21.54■■□□□ 1.04
SPG7-201ENST00000268704 RIPK4P57078 832 aa21.54■■□□□ 1.04
SPG7-201ENST00000268704 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
SPG7-201ENST00000268704 LNPKQ9C0E8 428 aa21.53■■□□□ 1.04
SPG7-201ENST00000268704 COL3A1P02461 1466 aaPredicted RBP21.52■■□□□ 1.03
SPG7-201ENST00000268704 ABCC11Q96J66 1382 aa21.52■■□□□ 1.03
SPG7-201ENST00000268704 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
SPG7-201ENST00000268704 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 RPGRIP1LQ68CZ1 1315 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 GOLGA6L3A6NEY3 463 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 FBLN1P23142 703 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 CHMP5Q9NZZ3 219 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 ABCC3O15438 1527 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 HECW2Q9P2P5 1572 aa21.51■■□□□ 1.03
SPG7-201ENST00000268704 CT47B1P0C2W7 299 aaPredicted RBP21.5■■□□□ 1.03
SPG7-201ENST00000268704 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
SPG7-201ENST00000268704 FYB1O15117 783 aa21.49■■□□□ 1.03
SPG7-201ENST00000268704 VGFO15240 615 aaPredicted RBP21.49■■□□□ 1.03
SPG7-201ENST00000268704 TRAK2O60296 914 aa21.49■■□□□ 1.03
SPG7-201ENST00000268704 HSCBQ8IWL3 235 aa21.49■■□□□ 1.03
SPG7-201ENST00000268704 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
SPG7-201ENST00000268704 FSD2A1L4K1 749 aa21.47■■□□□ 1.03
SPG7-201ENST00000268704 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
SPG7-201ENST00000268704 ZNF692Q9BU19 519 aaPredicted RBP21.47■■□□□ 1.03
SPG7-201ENST00000268704 C1orf115Q9H7X2 142 aa21.47■■□□□ 1.03
SPG7-201ENST00000268704 POGZQ7Z3K3 1410 aa21.47■■□□□ 1.03
SPG7-201ENST00000268704 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
SPG7-201ENST00000268704 IDI1Q13907 227 aa21.45■■□□□ 1.02
SPG7-201ENST00000268704 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
SPG7-201ENST00000268704 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
SPG7-201ENST00000268704 NUCB1Q02818 461 aa21.44■■□□□ 1.02
SPG7-201ENST00000268704 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
SPG7-201ENST00000268704 DIAPH1O60610 1272 aaKnown RBP21.44■■□□□ 1.02
SPG7-201ENST00000268704 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
SPG7-201ENST00000268704 RSPH6AQ9H0K4 717 aa21.44■■□□□ 1.02
SPG7-201ENST00000268704 PKNOX2Q96KN3 472 aa21.44■■□□□ 1.02
SPG7-201ENST00000268704 KIF16BQ96L93 1317 aa21.43■■□□□ 1.02
SPG7-201ENST00000268704 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
SPG7-201ENST00000268704 CD163L1Q9NR16 1453 aa21.43■■□□□ 1.02
SPG7-201ENST00000268704 CHD1LQ86WJ1 897 aa21.42■■□□□ 1.02
SPG7-201ENST00000268704 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
SPG7-201ENST00000268704 MYO5BQ9ULV0 1848 aa21.41■■□□□ 1.02
SPG7-201ENST00000268704 IL16Q14005 1332 aa21.41■■□□□ 1.02
SPG7-201ENST00000268704 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
SPG7-201ENST00000268704 IPO8O15397 1037 aaKnown RBP21.4■■□□□ 1.02
SPG7-201ENST00000268704 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
SPG7-201ENST00000268704 MLH3Q9UHC1 1453 aa21.4■■□□□ 1.02
SPG7-201ENST00000268704 CD2BP2O95400 341 aaKnown RBP21.4■■□□□ 1.02
SPG7-201ENST00000268704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
SPG7-201ENST00000268704 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
SPG7-201ENST00000268704 LRRC7Q96NW7 1537 aa21.4■■□□□ 1.02
SPG7-201ENST00000268704 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
SPG7-201ENST00000268704 HMOX1P09601 288 aa21.39■■□□□ 1.01
SPG7-201ENST00000268704 RBM25P49756 843 aaKnown RBP21.39■■□□□ 1.01
SPG7-201ENST00000268704 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
SPG7-201ENST00000268704 PTPRMP28827 1452 aa21.38■■□□□ 1.01
SPG7-201ENST00000268704 TSPYL6Q8N831 410 aa21.38■■□□□ 1.01
SPG7-201ENST00000268704 DDIT3P35638 169 aa21.38■■□□□ 1.01
SPG7-201ENST00000268704 TNPO1Q92973 898 aaKnown RBP21.38■■□□□ 1.01
SPG7-201ENST00000268704 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
SPG7-201ENST00000268704 DIP2BQ9P265 1576 aa21.37■■□□□ 1.01
SPG7-201ENST00000268704 PHACTR3Q96KR7 559 aa21.37■■□□□ 1.01
SPG7-201ENST00000268704 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
SPG7-201ENST00000268704 PPIP5K1Q6PFW1 1433 aa21.37■■□□□ 1.01
SPG7-201ENST00000268704 HSP90AB1P08238 724 aaKnown RBP21.37■■□□□ 1.01
SPG7-201ENST00000268704 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
SPG7-201ENST00000268704 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
SPG7-201ENST00000268704 KIF2CQ99661 725 aa21.36■■□□□ 1.01
SPG7-201ENST00000268704 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
SPG7-201ENST00000268704 DDX11L8A8MPP1 907 aa21.35■■□□□ 1.01
SPG7-201ENST00000268704 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
SPG7-201ENST00000268704 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
SPG7-201ENST00000268704 ZBTB7BO15156 539 aaPredicted RBP21.34■■□□□ 1.01
SPG7-201ENST00000268704 CDK19Q9BWU1 502 aa21.34■■□□□ 1.01
SPG7-201ENST00000268704 GRPEL1Q9HAV7 217 aa21.34■■□□□ 1.01
SPG7-201ENST00000268704 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1.01
SPG7-201ENST00000268704 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
SPG7-201ENST00000268704 HDGFL2Q7Z4V5 671 aaPredicted RBP21.33■■□□□ 1
SPG7-201ENST00000268704 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
SPG7-201ENST00000268704 SIRT2Q8IXJ6 389 aa21.32■■□□□ 1
SPG7-201ENST00000268704 SNX21Q969T3 373 aa21.32■■□□□ 1
SPG7-201ENST00000268704 MRE11P49959 708 aa21.32■■□□□ 1
SPG7-201ENST00000268704 MED14O60244 1454 aa21.32■■□□□ 1
SPG7-201ENST00000268704 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
SPG7-201ENST00000268704 FCHSD2O94868 740 aa21.32■■□□□ 1
SPG7-201ENST00000268704 YTHDC2Q9H6S0 1430 aaKnown RBP21.31■■□□□ 1
SPG7-201ENST00000268704 VAMP4O75379 141 aa21.31■■□□□ 1
SPG7-201ENST00000268704 HSP90AA1P07900 732 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms