RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
PDLIM2-201ENST00000265810 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
PDLIM2-201ENST00000265810 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
PDLIM2-201ENST00000265810 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
PDLIM2-201ENST00000265810 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 API5Q9BZZ5 524 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 CROCC2H7BZ55 1655 aa18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 BCAR3O75815 825 aa18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 HMMRO75330 724 aa18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-201ENST00000265810 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
PDLIM2-201ENST00000265810 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
PDLIM2-201ENST00000265810 DDX19BQ9UMR2 479 aa18.2■□□□□ 0.5
PDLIM2-201ENST00000265810 IQGAP3Q86VI3 1631 aa18.2■□□□□ 0.5
PDLIM2-201ENST00000265810 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 BECN1Q14457 450 aa18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
PDLIM2-201ENST00000265810 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
PDLIM2-201ENST00000265810 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
PDLIM2-201ENST00000265810 TET3O43151 1660 aa18.18■□□□□ 0.5
PDLIM2-201ENST00000265810 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
PDLIM2-201ENST00000265810 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
PDLIM2-201ENST00000265810 DCTN1Q14203 1278 aa18.17■□□□□ 0.5
PDLIM2-201ENST00000265810 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-201ENST00000265810 ABCC11Q96J66 1382 aa18.16■□□□□ 0.5
PDLIM2-201ENST00000265810 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
PDLIM2-201ENST00000265810 MSH6P52701 1360 aa18.16■□□□□ 0.5
PDLIM2-201ENST00000265810 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 UNC13BO14795 1591 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 MCM10Q7L590 875 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 POLKQ9UBT6 870 aa18.15■□□□□ 0.5
PDLIM2-201ENST00000265810 METP08581 1390 aa18.14■□□□□ 0.49
PDLIM2-201ENST00000265810 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-201ENST00000265810 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-201ENST00000265810 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 MYOM2P54296 1465 aa18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 NBR1Q14596 966 aa18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-201ENST00000265810 ANKRD45Q5TZF3 282 aa18.11■□□□□ 0.49
PDLIM2-201ENST00000265810 SPG7Q9UQ90 795 aa18.11■□□□□ 0.49
PDLIM2-201ENST00000265810 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-201ENST00000265810 GNAT3A8MTJ3 354 aa18.1■□□□□ 0.49
PDLIM2-201ENST00000265810 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
PDLIM2-201ENST00000265810 DDX58O95786 925 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-201ENST00000265810 PIK3C2GO75747 1445 aa18.1■□□□□ 0.49
PDLIM2-201ENST00000265810 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 KIF1BO60333 1816 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 KCNJ4P48050 445 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
PDLIM2-201ENST00000265810 HDGFL1Q5TGJ6 251 aa18.08■□□□□ 0.49
PDLIM2-201ENST00000265810 CLTCL1P53675 1640 aa18.08■□□□□ 0.48
PDLIM2-201ENST00000265810 SIRT1Q96EB6 747 aa18.08■□□□□ 0.48
PDLIM2-201ENST00000265810 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
PDLIM2-201ENST00000265810 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-201ENST00000265810 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-201ENST00000265810 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
PDLIM2-201ENST00000265810 CABP4P57796 275 aa18.07■□□□□ 0.48
PDLIM2-201ENST00000265810 PLEKHG1Q9ULL1 1385 aa18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 TSHZ2Q9NRE2 1034 aa18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 RNF17Q9BXT8 1623 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-201ENST00000265810 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 DIP2CQ9Y2E4 1556 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 CABLES1Q8TDN4 633 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 KDM5CP41229 1560 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
PDLIM2-201ENST00000265810 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 NLRP1Q9C000 1473 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 ANKRD24Q8TF21 1146 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 ATF7IPQ6VMQ6 1270 aa18.04■□□□□ 0.48
PDLIM2-201ENST00000265810 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-201ENST00000265810 FANCIQ9NVI1 1328 aa18.03■□□□□ 0.48
PDLIM2-201ENST00000265810 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
PDLIM2-201ENST00000265810 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
PDLIM2-201ENST00000265810 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms