RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
RBM48-201ENST00000265732 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
RBM48-201ENST00000265732 USP6P35125 1406 aa13.59□□□□□ -0.23
RBM48-201ENST00000265732 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
RBM48-201ENST00000265732 A0A1W2PP64 1363 aa13.58□□□□□ -0.23
RBM48-201ENST00000265732 CPSF1Q10570 1443 aaKnown RBP13.58□□□□□ -0.23
RBM48-201ENST00000265732 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
RBM48-201ENST00000265732 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
RBM48-201ENST00000265732 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
RBM48-201ENST00000265732 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
RBM48-201ENST00000265732 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
RBM48-201ENST00000265732 ARHGEF10O15013 1369 aa13.58□□□□□ -0.24
RBM48-201ENST00000265732 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
RBM48-201ENST00000265732 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
RBM48-201ENST00000265732 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
RBM48-201ENST00000265732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
RBM48-201ENST00000265732 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
RBM48-201ENST00000265732 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
RBM48-201ENST00000265732 SPATA31A6Q5VVP1 1343 aa13.56□□□□□ -0.24
RBM48-201ENST00000265732 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
RBM48-201ENST00000265732 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
RBM48-201ENST00000265732 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
RBM48-201ENST00000265732 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
RBM48-201ENST00000265732 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
RBM48-201ENST00000265732 NLRP6P59044 892 aa13.54□□□□□ -0.24
RBM48-201ENST00000265732 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
RBM48-201ENST00000265732 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
RBM48-201ENST00000265732 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
RBM48-201ENST00000265732 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
RBM48-201ENST00000265732 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
RBM48-201ENST00000265732 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
RBM48-201ENST00000265732 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
RBM48-201ENST00000265732 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
RBM48-201ENST00000265732 PANK3Q9H999 370 aa13.53□□□□□ -0.24
RBM48-201ENST00000265732 SSH2Q76I76 1423 aa13.52□□□□□ -0.24
RBM48-201ENST00000265732 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
RBM48-201ENST00000265732 NME9Q86XW9 330 aa13.51□□□□□ -0.25
RBM48-201ENST00000265732 ABCA3Q99758 1704 aa13.51□□□□□ -0.25
RBM48-201ENST00000265732 MED1Q15648 1581 aaPredicted RBP13.5□□□□□ -0.25
RBM48-201ENST00000265732 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
RBM48-201ENST00000265732 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
RBM48-201ENST00000265732 LRP6O75581 1613 aa13.5□□□□□ -0.25
RBM48-201ENST00000265732 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
RBM48-201ENST00000265732 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
RBM48-201ENST00000265732 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
RBM48-201ENST00000265732 SOX12O15370 315 aa13.49□□□□□ -0.25
RBM48-201ENST00000265732 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
RBM48-201ENST00000265732 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
RBM48-201ENST00000265732 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
RBM48-201ENST00000265732 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
RBM48-201ENST00000265732 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
RBM48-201ENST00000265732 COG3Q96JB2 828 aa13.47□□□□□ -0.25
RBM48-201ENST00000265732 FYB1O15117 783 aa13.47□□□□□ -0.25
RBM48-201ENST00000265732 GCP02774 474 aa13.47□□□□□ -0.25
RBM48-201ENST00000265732 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
RBM48-201ENST00000265732 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
RBM48-201ENST00000265732 USP19O94966 1318 aa13.46□□□□□ -0.26
RBM48-201ENST00000265732 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
RBM48-201ENST00000265732 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
RBM48-201ENST00000265732 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
RBM48-201ENST00000265732 USP31Q70CQ4 1352 aa13.45□□□□□ -0.26
RBM48-201ENST00000265732 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
RBM48-201ENST00000265732 LTN1O94822 1766 aa13.44□□□□□ -0.26
RBM48-201ENST00000265732 KIAA0232Q92628 1395 aa13.43□□□□□ -0.26
RBM48-201ENST00000265732 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
RBM48-201ENST00000265732 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
RBM48-201ENST00000265732 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
RBM48-201ENST00000265732 SLIT3O75094 1523 aa13.43□□□□□ -0.26
RBM48-201ENST00000265732 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
RBM48-201ENST00000265732 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 AFF2P51816 1311 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
RBM48-201ENST00000265732 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
RBM48-201ENST00000265732 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
RBM48-201ENST00000265732 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
RBM48-201ENST00000265732 USP21Q9UK80 565 aa13.41□□□□□ -0.26
RBM48-201ENST00000265732 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.26
RBM48-201ENST00000265732 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
RBM48-201ENST00000265732 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
RBM48-201ENST00000265732 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
RBM48-201ENST00000265732 FBLN1P23142 703 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
RBM48-201ENST00000265732 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
RBM48-201ENST00000265732 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
RBM48-201ENST00000265732 CPDO75976 1380 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 NSD2O96028 1365 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 NFAT5O94916 1531 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
RBM48-201ENST00000265732 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
RBM48-201ENST00000265732 EVA1CP58658 441 aa13.37□□□□□ -0.27
RBM48-201ENST00000265732 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
RBM48-201ENST00000265732 UNC5CLQ8IV45 518 aa13.37□□□□□ -0.27
RBM48-201ENST00000265732 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
RBM48-201ENST00000265732 SLIT2O94813 1529 aa13.37□□□□□ -0.27
RBM48-201ENST00000265732 PPM1GO15355 546 aaPredicted RBP13.36□□□□□ -0.27
RBM48-201ENST00000265732 AMPHP49418 695 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms