RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
CPT1A-201ENST00000265641 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
CPT1A-201ENST00000265641 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
CPT1A-201ENST00000265641 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
CPT1A-201ENST00000265641 RBM28Q9NW13 759 aaKnown RBP12.77□□□□□ -0.36
CPT1A-201ENST00000265641 MCM3P25205 808 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 KLHL40Q2TBA0 621 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 OGFRQ9NZT2 677 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 TUBB4AP04350 444 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 MYO6Q9UM54 1294 aa12.77□□□□□ -0.37
CPT1A-201ENST00000265641 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
CPT1A-201ENST00000265641 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
CPT1A-201ENST00000265641 SSR1P43307 286 aaKnown RBP12.76□□□□□ -0.37
CPT1A-201ENST00000265641 FAM193AP78312 1265 aa12.76□□□□□ -0.37
CPT1A-201ENST00000265641 UTP14CQ5TAP6 766 aaKnown RBP12.76□□□□□ -0.37
CPT1A-201ENST00000265641 ZKSCAN5Q9Y2L8 839 aa12.76□□□□□ -0.37
CPT1A-201ENST00000265641 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
CPT1A-201ENST00000265641 CBFA2T2O43439 604 aa12.75□□□□□ -0.37
CPT1A-201ENST00000265641 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CPT1A-201ENST00000265641 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
CPT1A-201ENST00000265641 ELL2O00472 640 aaPredicted RBP12.75□□□□□ -0.37
CPT1A-201ENST00000265641 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
CPT1A-201ENST00000265641 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
CPT1A-201ENST00000265641 CCDC91Q7Z6B0 441 aa12.74□□□□□ -0.37
CPT1A-201ENST00000265641 SMARCE1Q969G3 411 aa12.74□□□□□ -0.37
CPT1A-201ENST00000265641 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
CPT1A-201ENST00000265641 STK26Q9P289 416 aa12.74□□□□□ -0.37
CPT1A-201ENST00000265641 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
CPT1A-201ENST00000265641 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPT1A-201ENST00000265641 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
CPT1A-201ENST00000265641 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
CPT1A-201ENST00000265641 CPLX2Q6PUV4 134 aaKnown RBP12.73□□□□□ -0.37
CPT1A-201ENST00000265641 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
CPT1A-201ENST00000265641 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
CPT1A-201ENST00000265641 BCAR3O75815 825 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
CPT1A-201ENST00000265641 KINO60870 393 aaKnown RBP12.71□□□□□ -0.37
CPT1A-201ENST00000265641 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
CPT1A-201ENST00000265641 SPC24Q8NBT2 197 aa12.71□□□□□ -0.37
CPT1A-201ENST00000265641 POLR3GO15318 223 aaPredicted RBP12.71□□□□□ -0.37
CPT1A-201ENST00000265641 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.37
CPT1A-201ENST00000265641 PSMA5P28066 241 aa12.71□□□□□ -0.38
CPT1A-201ENST00000265641 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.38
CPT1A-201ENST00000265641 CCDC47Q96A33 483 aaKnown RBP12.71□□□□□ -0.38
CPT1A-201ENST00000265641 V9GYY5 206 aaPredicted RBP12.71□□□□□ -0.38
CPT1A-201ENST00000265641 CCDC171Q6TFL3 1326 aa12.71□□□□□ -0.38
CPT1A-201ENST00000265641 GOLGA6L10A6NI86 522 aa12.71□□□□□ -0.38
CPT1A-201ENST00000265641 CAVIN2O95810 425 aa12.71□□□□□ -0.38
CPT1A-201ENST00000265641 SOX12O15370 315 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
CPT1A-201ENST00000265641 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.38
CPT1A-201ENST00000265641 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 ZSCAN12O43309 604 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 RIPK4P57078 832 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
CPT1A-201ENST00000265641 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
CPT1A-201ENST00000265641 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 TNNT1P13805 278 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 DYDC1Q8WWB3 177 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
CPT1A-201ENST00000265641 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
CPT1A-201ENST00000265641 TRAK1Q9UPV9 953 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
CPT1A-201ENST00000265641 LRRCC1Q9C099 1032 aa12.69□□□□□ -0.38
CPT1A-201ENST00000265641 URB2Q14146 1524 aaKnown RBP12.69□□□□□ -0.38
CPT1A-201ENST00000265641 SMC2O95347 1197 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 KRT85P78386 507 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 SYCE3A1L190 88 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 NEFHP12036 1026 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 GSDMDP57764 484 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 KIAA1328Q86T90 577 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
CPT1A-201ENST00000265641 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 TDO2P48775 406 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 NEK4P51957 841 aa12.68□□□□□ -0.38
CPT1A-201ENST00000265641 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 TUBB4BP68371 445 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 TTC31Q49AM3 519 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-201ENST00000265641 FILIP1LQ4L180 1135 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
CPT1A-201ENST00000265641 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms