RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
SRF-201ENST00000265354 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
SRF-201ENST00000265354 CCDC39Q9UFE4 941 aa20.78■□□□□ 0.92
SRF-201ENST00000265354 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
SRF-201ENST00000265354 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
SRF-201ENST00000265354 AMPHP49418 695 aa20.78■□□□□ 0.92
SRF-201ENST00000265354 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
SRF-201ENST00000265354 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
SRF-201ENST00000265354 NPHP1O15259 732 aa20.77■□□□□ 0.92
SRF-201ENST00000265354 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
SRF-201ENST00000265354 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.92
SRF-201ENST00000265354 PRAG1Q86YV5 1406 aa20.77■□□□□ 0.92
SRF-201ENST00000265354 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
SRF-201ENST00000265354 ZNF830Q96NB3 372 aaPredicted RBP20.77■□□□□ 0.91
SRF-201ENST00000265354 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.91
SRF-201ENST00000265354 HSP90B1P14625 803 aaKnown RBP20.76■□□□□ 0.91
SRF-201ENST00000265354 NINLQ9Y2I6 1382 aa20.76■□□□□ 0.91
SRF-201ENST00000265354 TSPY26PQ9H489 355 aa20.76■□□□□ 0.91
SRF-201ENST00000265354 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
SRF-201ENST00000265354 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
SRF-201ENST00000265354 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
SRF-201ENST00000265354 MAGI3Q5TCQ9 1506 aa20.75■□□□□ 0.91
SRF-201ENST00000265354 GOLGA6L6A8MZA4 724 aa20.75■□□□□ 0.91
SRF-201ENST00000265354 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
SRF-201ENST00000265354 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
SRF-201ENST00000265354 DTNBO60941 627 aa20.74■□□□□ 0.91
SRF-201ENST00000265354 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
SRF-201ENST00000265354 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
SRF-201ENST00000265354 DIAPH3Q9NSV4 1193 aa20.73■□□□□ 0.91
SRF-201ENST00000265354 FAM83GA6ND36 823 aa20.73■□□□□ 0.91
SRF-201ENST00000265354 SULT6B1Q6IMI4 303 aa20.72■□□□□ 0.91
SRF-201ENST00000265354 CBX1P83916 185 aa20.72■□□□□ 0.91
SRF-201ENST00000265354 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
SRF-201ENST00000265354 GAS2L3Q86XJ1 694 aa20.72■□□□□ 0.91
SRF-201ENST00000265354 CHAMP1Q96JM3 812 aa20.72■□□□□ 0.91
SRF-201ENST00000265354 TCOF1Q13428 1488 aaKnown RBP20.71■□□□□ 0.91
SRF-201ENST00000265354 ERC2O15083 957 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 PLCD3Q8N3E9 789 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 FAM177BA6PVY3 158 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 F6X3S4 739 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 MBD3O95983 291 aa20.71■□□□□ 0.91
SRF-201ENST00000265354 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
SRF-201ENST00000265354 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
SRF-201ENST00000265354 APPP05067 770 aa20.7■□□□□ 0.91
SRF-201ENST00000265354 PDCL3Q9H2J4 239 aa20.7■□□□□ 0.91
SRF-201ENST00000265354 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
SRF-201ENST00000265354 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.9
SRF-201ENST00000265354 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
SRF-201ENST00000265354 BICD2Q8TD16 824 aa20.7■□□□□ 0.9
SRF-201ENST00000265354 USP25Q9UHP3 1055 aa20.7■□□□□ 0.9
SRF-201ENST00000265354 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
SRF-201ENST00000265354 ZSCAN23Q3MJ62 389 aa20.69■□□□□ 0.9
SRF-201ENST00000265354 BMP2KLQ5H9B9 411 aa20.69■□□□□ 0.9
SRF-201ENST00000265354 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
SRF-201ENST00000265354 MCM10Q7L590 875 aa20.68■□□□□ 0.9
SRF-201ENST00000265354 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
SRF-201ENST00000265354 BECN2A8MW95 431 aa20.68■□□□□ 0.9
SRF-201ENST00000265354 NUCB1Q02818 461 aa20.68■□□□□ 0.9
SRF-201ENST00000265354 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
SRF-201ENST00000265354 ATP6V1DQ9Y5K8 247 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 NRDCO43847 1150 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 CEBPZQ03701 1054 aaKnown RBP20.67■□□□□ 0.9
SRF-201ENST00000265354 TSPYL6Q8N831 410 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 EMILIN1Q9Y6C2 1016 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 CUL7Q14999 1698 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 KLHL40Q2TBA0 621 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
SRF-201ENST00000265354 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
SRF-201ENST00000265354 GOLGA6L19H0YKK7 550 aa20.66■□□□□ 0.9
SRF-201ENST00000265354 MAP7D2Q96T17 732 aa20.66■□□□□ 0.9
SRF-201ENST00000265354 CWC22Q9HCG8 908 aaKnown RBP20.66■□□□□ 0.9
SRF-201ENST00000265354 H3BQV1 296 aa20.66■□□□□ 0.9
SRF-201ENST00000265354 IFFO2Q5TF58 517 aa20.66■□□□□ 0.9
SRF-201ENST00000265354 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
SRF-201ENST00000265354 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
SRF-201ENST00000265354 TRIM5Q9C035 493 aa20.64■□□□□ 0.9
SRF-201ENST00000265354 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.9
SRF-201ENST00000265354 IGSF3O75054 1194 aa20.64■□□□□ 0.89
SRF-201ENST00000265354 USP19O94966 1318 aa20.63■□□□□ 0.89
SRF-201ENST00000265354 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
SRF-201ENST00000265354 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
SRF-201ENST00000265354 WAPLQ7Z5K2 1190 aa20.63■□□□□ 0.89
SRF-201ENST00000265354 KRT24Q2M2I5 525 aa20.63■□□□□ 0.89
SRF-201ENST00000265354 SPDYE4A6NLX3 237 aa20.62■□□□□ 0.89
SRF-201ENST00000265354 NUTM1Q86Y26 1132 aa20.62■□□□□ 0.89
SRF-201ENST00000265354 CAMK4Q16566 473 aa20.62■□□□□ 0.89
SRF-201ENST00000265354 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
SRF-201ENST00000265354 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
SRF-201ENST00000265354 FCHSD2O94868 740 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 ZKSCAN1P17029 563 aaPredicted RBP20.61■□□□□ 0.89
SRF-201ENST00000265354 OTUD7AQ8TE49 926 aaPredicted RBP20.61■□□□□ 0.89
SRF-201ENST00000265354 ANTXR1Q9H6X2 564 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 C9orf78Q9NZ63 289 aaPredicted RBP20.61■□□□□ 0.89
SRF-201ENST00000265354 STK3Q13188 491 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 CCAR2Q8N163 923 aaKnown RBP20.61■□□□□ 0.89
SRF-201ENST00000265354 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
SRF-201ENST00000265354 NFE2L2Q16236 605 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms