RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 USP6P35125 1406 aa10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 A0A1W2PP64 1363 aa10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 CD163L1Q9NR16 1453 aa10.13□□□□□ -0.79
DEPDC1B-201ENST00000265036 MON2Q7Z3U7 1717 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■□□□□ 9.3
DEPDC1B-201ENST00000265036 SPATA31A6Q5VVP1 1343 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 KTN1Q86UP2 1357 aaKnown RBP10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 NRKQ7Z2Y5 1582 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 SOX12O15370 315 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 SBNO1A3KN83 1393 aa10.12□□□□□ -0.79
DEPDC1B-201ENST00000265036 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
DEPDC1B-201ENST00000265036 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
DEPDC1B-201ENST00000265036 ARHGEF10O15013 1369 aa10.11□□□□□ -0.79
DEPDC1B-201ENST00000265036 CRYBG1Q9Y4K1 1723 aa10.11□□□□□ -0.79
DEPDC1B-201ENST00000265036 PHRF1Q9P1Y6 1649 aaKnown RBP10.1□□□□□ -0.79
DEPDC1B-201ENST00000265036 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
DEPDC1B-201ENST00000265036 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
DEPDC1B-201ENST00000265036 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
DEPDC1B-201ENST00000265036 EP400Q96L91 3159 aa10.09□□□□□ -0.79
DEPDC1B-201ENST00000265036 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
DEPDC1B-201ENST00000265036 NME9Q86XW9 330 aa10.09□□□□□ -0.79
DEPDC1B-201ENST00000265036 RGS17Q9UGC6 210 aaPredicted RBP10.09□□□□□ -0.79
DEPDC1B-201ENST00000265036 AFF2P51816 1311 aa10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 TTC21BQ7Z4L5 1316 aa10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 NLRP6P59044 892 aa10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 HDGFL2Q7Z4V5 671 aaPredicted RBP10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 NGLY1Q96IV0 654 aa10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
DEPDC1B-201ENST00000265036 TERF2IPQ9NYB0 399 aa10.07□□□□□ -0.8
DEPDC1B-201ENST00000265036 PLCH1Q4KWH8 1693 aa10.07□□□□□ -0.8
DEPDC1B-201ENST00000265036 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
DEPDC1B-201ENST00000265036 CHRNA2Q15822 529 aa10.07□□□□□ -0.8
DEPDC1B-201ENST00000265036 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
DEPDC1B-201ENST00000265036 ANKRD36BQ8N2N9 1353 aa10.06□□□□□ -0.8
DEPDC1B-201ENST00000265036 EDC4Q6P2E9 1401 aaKnown RBP10.06□□□□□ -0.8
DEPDC1B-201ENST00000265036 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
DEPDC1B-201ENST00000265036 POTEAQ6S8J7 498 aa10.06□□□□□ -0.8
DEPDC1B-201ENST00000265036 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
DEPDC1B-201ENST00000265036 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 ZNF692Q9BU19 519 aaPredicted RBP10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 PRDM11Q9NQV5 511 aa10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
DEPDC1B-201ENST00000265036 KIF20BQ96Q89 1820 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 NLRP13Q86W25 1043 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 GGNBP2Q9H3C7 697 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 FBLN1P23142 703 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 PUS7Q96PZ0 661 aaKnown RBP10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 USP21Q9UK80 565 aa10.04□□□□□ -0.8
DEPDC1B-201ENST00000265036 USP19O94966 1318 aa10.03□□□□□ -0.8
DEPDC1B-201ENST00000265036 WASHC2AQ641Q2 1341 aa10.03□□□□□ -0.8
DEPDC1B-201ENST00000265036 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
DEPDC1B-201ENST00000265036 GCP02774 474 aa10.03□□□□□ -0.8
DEPDC1B-201ENST00000265036 TTC21AQ8NDW8 1320 aa10.03□□□□□ -0.8
DEPDC1B-201ENST00000265036 LTN1O94822 1766 aa10.02□□□□□ -0.8
DEPDC1B-201ENST00000265036 SLIT3O75094 1523 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 PANK3Q9H999 370 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 BTG4Q9NY30 223 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 RGPD5Q99666 1765 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 OVOS2A0A0J9YW53 1432 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 OVOS2Q6IE36 1432 aa10.02□□□□□ -0.81
DEPDC1B-201ENST00000265036 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 NRAPQ86VF7 1730 aa10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 SLIT2O94813 1529 aa10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 NFAT5O94916 1531 aa10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 STRN4Q9NRL3 753 aa10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
DEPDC1B-201ENST00000265036 TNNT2P45379 298 aaPredicted RBP10□□□□□ -0.81
DEPDC1B-201ENST00000265036 ZNF772Q68DY9 489 aaPredicted RBP10□□□□□ -0.81
DEPDC1B-201ENST00000265036 QTRT2Q9H974 415 aaKnown RBP10□□□□□ -0.81
DEPDC1B-201ENST00000265036 NWD2Q9ULI1 1742 aa10□□□□□ -0.81
DEPDC1B-201ENST00000265036 USP54Q70EL1 1684 aa10□□□□□ -0.81
DEPDC1B-201ENST00000265036 FYB1O15117 783 aa9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 FNBP4Q8N3X1 1017 aaPredicted RBP9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 COG3Q96JB2 828 aa9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
DEPDC1B-201ENST00000265036 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
DEPDC1B-201ENST00000265036 RRS1Q15050 365 aaKnown RBP9.98□□□□□ -0.81
DEPDC1B-201ENST00000265036 UNC5CLQ8IV45 518 aa9.98□□□□□ -0.81
DEPDC1B-201ENST00000265036 GLI3P10071 1580 aa9.98□□□□□ -0.81
DEPDC1B-201ENST00000265036 USP31Q70CQ4 1352 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 COL18A1P39060 1754 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 A0A0G2JS52 829 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 MYT1Q01538 1121 aa9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
DEPDC1B-201ENST00000265036 ATRNO75882 1429 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 704.3 ms