RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 PPIP5K1Q6PFW1 1433 aa18.72■□□□□ 0.59
PDCD6-201ENST00000264933 ATAD2Q6PL18 1390 aa18.71■□□□□ 0.59
PDCD6-201ENST00000264933 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
PDCD6-201ENST00000264933 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
PDCD6-201ENST00000264933 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
PDCD6-201ENST00000264933 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
PDCD6-201ENST00000264933 ACEP12821 1306 aa18.69■□□□□ 0.58
PDCD6-201ENST00000264933 ATRNO75882 1429 aa18.68■□□□□ 0.58
PDCD6-201ENST00000264933 USP21Q9UK80 565 aa18.68■□□□□ 0.58
PDCD6-201ENST00000264933 CPSF1Q10570 1443 aaKnown RBP18.67■□□□□ 0.58
PDCD6-201ENST00000264933 BCL9LQ86UU0 1499 aa18.67■□□□□ 0.58
PDCD6-201ENST00000264933 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
PDCD6-201ENST00000264933 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
PDCD6-201ENST00000264933 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
PDCD6-201ENST00000264933 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
PDCD6-201ENST00000264933 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
PDCD6-201ENST00000264933 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
PDCD6-201ENST00000264933 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
PDCD6-201ENST00000264933 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PDCD6-201ENST00000264933 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
PDCD6-201ENST00000264933 CCDC7Q96M83 1385 aa18.64■□□□□ 0.57
PDCD6-201ENST00000264933 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
PDCD6-201ENST00000264933 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
PDCD6-201ENST00000264933 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
PDCD6-201ENST00000264933 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
PDCD6-201ENST00000264933 EP400Q96L91 3159 aa18.63■□□□□ 0.57
PDCD6-201ENST00000264933 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
PDCD6-201ENST00000264933 A0A1W2PP64 1363 aa18.61■□□□□ 0.57
PDCD6-201ENST00000264933 PSME1Q06323 249 aa18.61■□□□□ 0.57
PDCD6-201ENST00000264933 SLIT2O94813 1529 aa18.6■□□□□ 0.57
PDCD6-201ENST00000264933 USP6P35125 1406 aa18.6■□□□□ 0.57
PDCD6-201ENST00000264933 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
PDCD6-201ENST00000264933 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
PDCD6-201ENST00000264933 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
PDCD6-201ENST00000264933 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
PDCD6-201ENST00000264933 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
PDCD6-201ENST00000264933 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
PDCD6-201ENST00000264933 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
PDCD6-201ENST00000264933 KTN1Q86UP2 1357 aaKnown RBP18.56■□□□□ 0.56
PDCD6-201ENST00000264933 TERF2IPQ9NYB0 399 aa18.56■□□□□ 0.56
PDCD6-201ENST00000264933 CRYBG1Q9Y4K1 1723 aa18.56■□□□□ 0.56
PDCD6-201ENST00000264933 PIK3C2AO00443 1686 aa18.56■□□□□ 0.56
PDCD6-201ENST00000264933 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-201ENST00000264933 GLI3P10071 1580 aa18.55■□□□□ 0.56
PDCD6-201ENST00000264933 TTC21BQ7Z4L5 1316 aa18.55■□□□□ 0.56
PDCD6-201ENST00000264933 ABCA3Q99758 1704 aa18.55■□□□□ 0.56
PDCD6-201ENST00000264933 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-201ENST00000264933 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
PDCD6-201ENST00000264933 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
PDCD6-201ENST00000264933 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
PDCD6-201ENST00000264933 UNC5CLQ8IV45 518 aa18.54■□□□□ 0.56
PDCD6-201ENST00000264933 PANK3Q9H999 370 aa18.54■□□□□ 0.56
PDCD6-201ENST00000264933 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
PDCD6-201ENST00000264933 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
PDCD6-201ENST00000264933 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
PDCD6-201ENST00000264933 ZNF316A6NFI3 1004 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-201ENST00000264933 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
PDCD6-201ENST00000264933 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
PDCD6-201ENST00000264933 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
PDCD6-201ENST00000264933 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
PDCD6-201ENST00000264933 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
PDCD6-201ENST00000264933 PLCH1Q4KWH8 1693 aa18.49■□□□□ 0.55
PDCD6-201ENST00000264933 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
PDCD6-201ENST00000264933 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
PDCD6-201ENST00000264933 NME9Q86XW9 330 aa18.48■□□□□ 0.55
PDCD6-201ENST00000264933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDCD6-201ENST00000264933 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
PDCD6-201ENST00000264933 PHRF1Q9P1Y6 1649 aaKnown RBP18.48■□□□□ 0.55
PDCD6-201ENST00000264933 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
PDCD6-201ENST00000264933 FYB1O15117 783 aa18.47■□□□□ 0.55
PDCD6-201ENST00000264933 NUTM2GQ5VZR2 741 aa18.47■□□□□ 0.55
PDCD6-201ENST00000264933 NWD2Q9ULI1 1742 aa18.46■□□□□ 0.55
PDCD6-201ENST00000264933 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
PDCD6-201ENST00000264933 VPS72Q15906 364 aa18.46■□□□□ 0.55
PDCD6-201ENST00000264933 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
PDCD6-201ENST00000264933 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
PDCD6-201ENST00000264933 USP19O94966 1318 aa18.45■□□□□ 0.54
PDCD6-201ENST00000264933 SLIT3O75094 1523 aa18.44■□□□□ 0.54
PDCD6-201ENST00000264933 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
PDCD6-201ENST00000264933 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
PDCD6-201ENST00000264933 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
PDCD6-201ENST00000264933 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
PDCD6-201ENST00000264933 NLRP6P59044 892 aa18.43■□□□□ 0.54
PDCD6-201ENST00000264933 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
PDCD6-201ENST00000264933 BRWD3Q6RI45 1802 aa18.42■□□□□ 0.54
PDCD6-201ENST00000264933 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
PDCD6-201ENST00000264933 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
PDCD6-201ENST00000264933 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
PDCD6-201ENST00000264933 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
PDCD6-201ENST00000264933 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
PDCD6-201ENST00000264933 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
PDCD6-201ENST00000264933 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
PDCD6-201ENST00000264933 NFAT5O94916 1531 aa18.39■□□□□ 0.53
PDCD6-201ENST00000264933 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
PDCD6-201ENST00000264933 MAP2P11137 1827 aaKnown RBP18.38■□□□□ 0.53
PDCD6-201ENST00000264933 GCP02774 474 aa18.38■□□□□ 0.53
PDCD6-201ENST00000264933 KNSTRNQ9Y448 316 aa18.38■□□□□ 0.53
PDCD6-201ENST00000264933 BLMP54132 1417 aaPredicted RBP18.38■□□□□ 0.53
PDCD6-201ENST00000264933 COL18A1P39060 1754 aa18.37■□□□□ 0.53
PDCD6-201ENST00000264933 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms