RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CNTROBQ8N137 903 aa17.81■□□□□ 0.44
CCDC6-201ENST00000263102 PTPRGP23470 1445 aa17.8■□□□□ 0.44
CCDC6-201ENST00000263102 GNAI1P63096 354 aa17.8■□□□□ 0.44
CCDC6-201ENST00000263102 TEX35Q5T0J7 233 aa17.8■□□□□ 0.44
CCDC6-201ENST00000263102 PLCD4Q9BRC7 762 aa17.8■□□□□ 0.44
CCDC6-201ENST00000263102 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
CCDC6-201ENST00000263102 SSR1P43307 286 aaKnown RBP17.8■□□□□ 0.44
CCDC6-201ENST00000263102 ZRSR2Q15696 482 aaKnown RBP17.79■□□□□ 0.44
CCDC6-201ENST00000263102 FMNL2Q96PY5 1086 aa17.79■□□□□ 0.44
CCDC6-201ENST00000263102 SMC2O95347 1197 aa17.79■□□□□ 0.44
CCDC6-201ENST00000263102 IPO9Q96P70 1041 aaKnown RBP17.79■□□□□ 0.44
CCDC6-201ENST00000263102 LNPKQ9C0E8 428 aa17.79■□□□□ 0.44
CCDC6-201ENST00000263102 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
CCDC6-201ENST00000263102 CENPQQ7L2Z9 268 aaPredicted RBP17.79■□□□□ 0.44
CCDC6-201ENST00000263102 CCDC85AQ96PX6 553 aaPredicted RBP17.79■□□□□ 0.44
CCDC6-201ENST00000263102 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
CCDC6-201ENST00000263102 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
CCDC6-201ENST00000263102 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
CCDC6-201ENST00000263102 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC6-201ENST00000263102 PSMA5P28066 241 aa17.78■□□□□ 0.44
CCDC6-201ENST00000263102 RAI14Q9P0K7 980 aa17.78■□□□□ 0.44
CCDC6-201ENST00000263102 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.44
CCDC6-201ENST00000263102 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
CCDC6-201ENST00000263102 ENOX2Q16206 610 aaKnown RBP17.77■□□□□ 0.43
CCDC6-201ENST00000263102 NAT10Q9H0A0 1025 aaKnown RBP17.76■□□□□ 0.43
CCDC6-201ENST00000263102 TRIM21P19474 475 aaKnown RBP17.76■□□□□ 0.43
CCDC6-201ENST00000263102 ACBD3Q9H3P7 528 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 DESP17661 470 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 CHMP5Q9NZZ3 219 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
CCDC6-201ENST00000263102 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 STK3Q13188 491 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 HSP90B2PQ58FF3 399 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 PSMD1Q99460 953 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 MAP4K4O95819 1239 aaPredicted RBP17.75■□□□□ 0.43
CCDC6-201ENST00000263102 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
CCDC6-201ENST00000263102 CLASRPQ8N2M8 674 aaKnown RBP17.74■□□□□ 0.43
CCDC6-201ENST00000263102 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
CCDC6-201ENST00000263102 ANKRD18AQ8IVF6 992 aa17.74■□□□□ 0.43
CCDC6-201ENST00000263102 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC6-201ENST00000263102 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
CCDC6-201ENST00000263102 SMARCE1Q969G3 411 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 DEF6Q9H4E7 631 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 TTC16Q8NEE8 873 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
CCDC6-201ENST00000263102 ECM2O94769 699 aaPredicted RBP17.73■□□□□ 0.43
CCDC6-201ENST00000263102 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
CCDC6-201ENST00000263102 LIG1P18858 919 aa17.72■□□□□ 0.43
CCDC6-201ENST00000263102 RUNDC1Q96C34 613 aa17.72■□□□□ 0.43
CCDC6-201ENST00000263102 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
CCDC6-201ENST00000263102 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
CCDC6-201ENST00000263102 CCDC181Q5TID7 509 aa17.71■□□□□ 0.43
CCDC6-201ENST00000263102 ZPR1O75312 459 aa17.71■□□□□ 0.43
CCDC6-201ENST00000263102 ARGLU1Q9NWB6 273 aaPredicted RBP17.71■□□□□ 0.43
CCDC6-201ENST00000263102 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
CCDC6-201ENST00000263102 TDO2P48775 406 aa17.71■□□□□ 0.42
CCDC6-201ENST00000263102 NACADO15069 1562 aa17.7■□□□□ 0.42
CCDC6-201ENST00000263102 MTHFSP49914 203 aa17.7■□□□□ 0.42
CCDC6-201ENST00000263102 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
CCDC6-201ENST00000263102 STK38Q15208 465 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 ERLIN2O94905 339 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 ANKIB1Q9P2G1 1089 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 H0YHG0 523 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
CCDC6-201ENST00000263102 LRP2BPQ9P2M1 347 aa17.69■□□□□ 0.42
CCDC6-201ENST00000263102 NOM1Q5C9Z4 860 aaKnown RBP17.68■□□□□ 0.42
CCDC6-201ENST00000263102 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
CCDC6-201ENST00000263102 VTI1AQ96AJ9 217 aa17.68■□□□□ 0.42
CCDC6-201ENST00000263102 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
CCDC6-201ENST00000263102 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
CCDC6-201ENST00000263102 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
CCDC6-201ENST00000263102 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
CCDC6-201ENST00000263102 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
CCDC6-201ENST00000263102 ZNHIT6Q9NWK9 470 aaKnown RBP17.67■□□□□ 0.42
CCDC6-201ENST00000263102 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
CCDC6-201ENST00000263102 KINO60870 393 aaKnown RBP17.66■□□□□ 0.42
CCDC6-201ENST00000263102 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
CCDC6-201ENST00000263102 TNIP1Q15025 636 aa17.66■□□□□ 0.42
CCDC6-201ENST00000263102 ZC3H6P61129 1189 aaKnown RBP17.66■□□□□ 0.42
CCDC6-201ENST00000263102 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
CCDC6-201ENST00000263102 ABCF2Q9UG63 623 aa17.66■□□□□ 0.42
CCDC6-201ENST00000263102 CENPHQ9H3R5 247 aa17.66■□□□□ 0.42
CCDC6-201ENST00000263102 POLR3DP05423 398 aaPredicted RBP17.65■□□□□ 0.42
CCDC6-201ENST00000263102 PDE4AP27815 886 aa17.65■□□□□ 0.42
CCDC6-201ENST00000263102 STIM1Q13586 685 aa17.65■□□□□ 0.42
CCDC6-201ENST00000263102 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
CCDC6-201ENST00000263102 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
CCDC6-201ENST00000263102 UBAC1Q9BSL1 405 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 FAM13BQ9NYF5 915 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 ANAPC15P60006 121 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 COMMD10Q9Y6G5 202 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 DNAI2Q9GZS0 605 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms