RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 NUDT16Q96DE0 195 aaKnown RBP12.22□□□□□ -0.45
SIM1-201ENST00000262901 CABP1Q9NZU7 370 aa12.22□□□□□ -0.45
SIM1-201ENST00000262901 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
SIM1-201ENST00000262901 KIAA1210Q9ULL0 1709 aa12.22□□□□□ -0.45
SIM1-201ENST00000262901 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
SIM1-201ENST00000262901 ADAMTSL3P82987 1691 aa12.22□□□□□ -0.45
SIM1-201ENST00000262901 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
SIM1-201ENST00000262901 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
SIM1-201ENST00000262901 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
SIM1-201ENST00000262901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
SIM1-201ENST00000262901 NLRP13Q86W25 1043 aa12.2□□□□□ -0.46
SIM1-201ENST00000262901 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SIM1-201ENST00000262901 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
SIM1-201ENST00000262901 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
SIM1-201ENST00000262901 SLIT1O75093 1534 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 MYO3AQ8NEV4 1616 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 SPRYD3Q8NCJ5 442 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 PLIN1O60240 522 aa12.19□□□□□ -0.46
SIM1-201ENST00000262901 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
SIM1-201ENST00000262901 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
SIM1-201ENST00000262901 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
SIM1-201ENST00000262901 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
SIM1-201ENST00000262901 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
SIM1-201ENST00000262901 MYO5BQ9ULV0 1848 aa12.17□□□□□ -0.46
SIM1-201ENST00000262901 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
SIM1-201ENST00000262901 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
SIM1-201ENST00000262901 ROBO2Q9HCK4 1378 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 ADGRB1O14514 1584 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 COG3Q96JB2 828 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 PSME1Q06323 249 aa12.16□□□□□ -0.46
SIM1-201ENST00000262901 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
SIM1-201ENST00000262901 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
SIM1-201ENST00000262901 KCNG1Q9UIX4 513 aa12.15□□□□□ -0.46
SIM1-201ENST00000262901 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
SIM1-201ENST00000262901 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
SIM1-201ENST00000262901 EXOC6Q8TAG9 804 aa12.14□□□□□ -0.47
SIM1-201ENST00000262901 ANKRD36BQ8N2N9 1353 aa12.14□□□□□ -0.47
SIM1-201ENST00000262901 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
SIM1-201ENST00000262901 ZBTB7CA1YPR0 619 aa12.14□□□□□ -0.47
SIM1-201ENST00000262901 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
SIM1-201ENST00000262901 SOX12O15370 315 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
SIM1-201ENST00000262901 C19orf44Q9H6X5 657 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 DLC1Q96QB1 1528 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 CNPY4Q8N129 248 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
SIM1-201ENST00000262901 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
SIM1-201ENST00000262901 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
SIM1-201ENST00000262901 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
SIM1-201ENST00000262901 MSH6P52701 1360 aa12.12□□□□□ -0.47
SIM1-201ENST00000262901 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
SIM1-201ENST00000262901 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
SIM1-201ENST00000262901 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
SIM1-201ENST00000262901 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
SIM1-201ENST00000262901 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
SIM1-201ENST00000262901 TECPR2O15040 1411 aa12.11□□□□□ -0.47
SIM1-201ENST00000262901 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
SIM1-201ENST00000262901 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
SIM1-201ENST00000262901 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
SIM1-201ENST00000262901 ACEP12821 1306 aa12.1□□□□□ -0.47
SIM1-201ENST00000262901 ZNF830Q96NB3 372 aaPredicted RBP12.1□□□□□ -0.47
SIM1-201ENST00000262901 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
SIM1-201ENST00000262901 NSD2O96028 1365 aa12.09□□□□□ -0.47
SIM1-201ENST00000262901 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
SIM1-201ENST00000262901 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
SIM1-201ENST00000262901 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
SIM1-201ENST00000262901 ASXL1Q8IXJ9 1541 aa12.09□□□□□ -0.47
SIM1-201ENST00000262901 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
SIM1-201ENST00000262901 U2AF1L5P0DN76 240 aaPredicted RBP12.09□□□□□ -0.47
SIM1-201ENST00000262901 U2AF1Q01081 240 aaKnown RBP eCLIP12.09□□□□□ -0.47
SIM1-201ENST00000262901 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
SIM1-201ENST00000262901 NLRP6P59044 892 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 A0A1W2PP64 1363 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 PTPRUQ92729 1446 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 ABTB2Q8N961 1025 aa12.08□□□□□ -0.48
SIM1-201ENST00000262901 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
SIM1-201ENST00000262901 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
SIM1-201ENST00000262901 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
SIM1-201ENST00000262901 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
SIM1-201ENST00000262901 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
SIM1-201ENST00000262901 BCCIPQ9P287 314 aaKnown RBP eCLIP12.06□□□□□ -0.48
SIM1-201ENST00000262901 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 VGLL3A8MV65 326 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 PDE4AP27815 886 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 AMPHP49418 695 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 FOXO3O43524 673 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
SIM1-201ENST00000262901 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
SIM1-201ENST00000262901 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
SIM1-201ENST00000262901 MTHFSP49914 203 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms