RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 KRT24Q2M2I5 525 aa19.13■□□□□ 0.65
TIMP2-201ENST00000262768 NKTRP30414 1462 aaKnown RBP19.13■□□□□ 0.65
TIMP2-201ENST00000262768 MS4A1P11836 297 aa19.13■□□□□ 0.65
TIMP2-201ENST00000262768 DDRGK1Q96HY6 314 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 TET3O43151 1660 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 METP08581 1390 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 PIK3C2GO75747 1445 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 ABCC3O15438 1527 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 TMEM57Q8N5G2 664 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
TIMP2-201ENST00000262768 TWISTNBQ3B726 338 aaPredicted RBP19.11■□□□□ 0.65
TIMP2-201ENST00000262768 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
TIMP2-201ENST00000262768 FOXO3O43524 673 aa19.11■□□□□ 0.65
TIMP2-201ENST00000262768 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
TIMP2-201ENST00000262768 PCDHB15Q9Y5E8 787 aa19.1■□□□□ 0.65
TIMP2-201ENST00000262768 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
TIMP2-201ENST00000262768 PPIP5K1Q6PFW1 1433 aa19.1■□□□□ 0.65
TIMP2-201ENST00000262768 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
TIMP2-201ENST00000262768 FCHSD2O94868 740 aa19.1■□□□□ 0.65
TIMP2-201ENST00000262768 CALD1Q05682 793 aaKnown RBP19.1■□□□□ 0.65
TIMP2-201ENST00000262768 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
TIMP2-201ENST00000262768 TRIM27P14373 513 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 PDE3AQ14432 1141 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 MADDQ8WXG6 1647 aa19.09■□□□□ 0.65
TIMP2-201ENST00000262768 PPRC1Q5VV67 1664 aaKnown RBP19.08■□□□□ 0.65
TIMP2-201ENST00000262768 ATF7IPQ6VMQ6 1270 aa19.08■□□□□ 0.65
TIMP2-201ENST00000262768 NGEFQ8N5V2 710 aa19.08■□□□□ 0.65
TIMP2-201ENST00000262768 KCNA6P17658 529 aa19.08■□□□□ 0.64
TIMP2-201ENST00000262768 KIF1BO60333 1816 aa19.08■□□□□ 0.64
TIMP2-201ENST00000262768 GNAI1P63096 354 aa19.07■□□□□ 0.64
TIMP2-201ENST00000262768 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
TIMP2-201ENST00000262768 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
TIMP2-201ENST00000262768 TPRNQ4KMQ1 711 aa19.06■□□□□ 0.64
TIMP2-201ENST00000262768 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
TIMP2-201ENST00000262768 LMOD3Q0VAK6 560 aa19.06■□□□□ 0.64
TIMP2-201ENST00000262768 ARAP3Q8WWN8 1544 aa19.06■□□□□ 0.64
TIMP2-201ENST00000262768 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
TIMP2-201ENST00000262768 MVPQ14764 893 aaKnown RBP19.05■□□□□ 0.64
TIMP2-201ENST00000262768 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
TIMP2-201ENST00000262768 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
TIMP2-201ENST00000262768 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
TIMP2-201ENST00000262768 MAP3K4Q9Y6R4 1608 aa19.04■□□□□ 0.64
TIMP2-201ENST00000262768 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
TIMP2-201ENST00000262768 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
TIMP2-201ENST00000262768 PROSER2Q86WR7 435 aaPredicted RBP19.03■□□□□ 0.64
TIMP2-201ENST00000262768 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
TIMP2-201ENST00000262768 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
TIMP2-201ENST00000262768 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
TIMP2-201ENST00000262768 BECN1Q14457 450 aa19.02■□□□□ 0.64
TIMP2-201ENST00000262768 MYOM2P54296 1465 aa19.02■□□□□ 0.64
TIMP2-201ENST00000262768 TTC21BQ7Z4L5 1316 aa19.02■□□□□ 0.63
TIMP2-201ENST00000262768 SLC4A2P04920 1241 aa19.02■□□□□ 0.63
TIMP2-201ENST00000262768 MBIPQ9NS73 344 aa19.02■□□□□ 0.63
TIMP2-201ENST00000262768 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
TIMP2-201ENST00000262768 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
TIMP2-201ENST00000262768 KDM5AP29375 1690 aaKnown RBP19.01■□□□□ 0.63
TIMP2-201ENST00000262768 EIF4A2Q14240 407 aaKnown RBP19■□□□□ 0.63
TIMP2-201ENST00000262768 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
TIMP2-201ENST00000262768 ZNF521Q96K83 1311 aa19■□□□□ 0.63
TIMP2-201ENST00000262768 KIF16BQ96L93 1317 aa19■□□□□ 0.63
TIMP2-201ENST00000262768 F6X3S4 739 aa18.99■□□□□ 0.63
TIMP2-201ENST00000262768 RTN4Q9NQC3 1192 aaKnown RBP18.99■□□□□ 0.63
TIMP2-201ENST00000262768 ZMYM4Q5VZL5 1548 aa18.99■□□□□ 0.63
TIMP2-201ENST00000262768 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
TIMP2-201ENST00000262768 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
TIMP2-201ENST00000262768 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
TIMP2-201ENST00000262768 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
TIMP2-201ENST00000262768 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
TIMP2-201ENST00000262768 SBNO2Q9Y2G9 1366 aa18.96■□□□□ 0.63
TIMP2-201ENST00000262768 TEFQ10587 303 aa18.96■□□□□ 0.63
TIMP2-201ENST00000262768 NLRP2Q9NX02 1062 aa18.95■□□□□ 0.62
TIMP2-201ENST00000262768 ABCC11Q96J66 1382 aa18.95■□□□□ 0.62
TIMP2-201ENST00000262768 SEC24BO95487 1268 aa18.95■□□□□ 0.62
TIMP2-201ENST00000262768 GZF1Q9H116 711 aaPredicted RBP18.94■□□□□ 0.62
TIMP2-201ENST00000262768 NSD2O96028 1365 aa18.94■□□□□ 0.62
TIMP2-201ENST00000262768 HSPA2P54652 639 aa18.94■□□□□ 0.62
TIMP2-201ENST00000262768 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
TIMP2-201ENST00000262768 SYNMO15061 1565 aa18.94■□□□□ 0.62
TIMP2-201ENST00000262768 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
TIMP2-201ENST00000262768 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
TIMP2-201ENST00000262768 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
TIMP2-201ENST00000262768 PHF8Q9UPP1 1060 aa18.93■□□□□ 0.62
TIMP2-201ENST00000262768 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
TIMP2-201ENST00000262768 AIMP1Q12904 312 aaKnown RBP18.93■□□□□ 0.62
TIMP2-201ENST00000262768 ANXA1P04083 346 aa18.93■□□□□ 0.62
TIMP2-201ENST00000262768 DDX17Q92841 729 aaKnown RBP18.93■□□□□ 0.62
TIMP2-201ENST00000262768 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
TIMP2-201ENST00000262768 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
TIMP2-201ENST00000262768 IL13P35225 146 aa18.92■□□□□ 0.62
TIMP2-201ENST00000262768 ADGRB3O60242 1522 aa18.92■□□□□ 0.62
TIMP2-201ENST00000262768 LRRC59Q96AG4 307 aaKnown RBP18.91■□□□□ 0.62
TIMP2-201ENST00000262768 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
TIMP2-201ENST00000262768 CFAP74Q9C0B2 1584 aa18.9■□□□□ 0.62
TIMP2-201ENST00000262768 API5Q9BZZ5 524 aaKnown RBP18.9■□□□□ 0.62
TIMP2-201ENST00000262768 TRIM6-TRIM34B2RNG4 842 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms