RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TESK2Q96S53 571 aa16.28■□□□□ 0.2
PFDN1-201ENST00000261813 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
PFDN1-201ENST00000261813 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
PFDN1-201ENST00000261813 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
PFDN1-201ENST00000261813 NHSL1Q5SYE7 1610 aa16.27■□□□□ 0.19
PFDN1-201ENST00000261813 DDX17Q92841 729 aaKnown RBP16.26■□□□□ 0.19
PFDN1-201ENST00000261813 CABP2Q9NPB3 220 aa16.26■□□□□ 0.19
PFDN1-201ENST00000261813 EVC2Q86UK5 1308 aa16.26■□□□□ 0.19
PFDN1-201ENST00000261813 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
PFDN1-201ENST00000261813 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
PFDN1-201ENST00000261813 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
PFDN1-201ENST00000261813 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
PFDN1-201ENST00000261813 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
PFDN1-201ENST00000261813 PHF8Q9UPP1 1060 aa16.25■□□□□ 0.19
PFDN1-201ENST00000261813 PHLPP1O60346 1717 aa16.24■□□□□ 0.19
PFDN1-201ENST00000261813 COL16A1Q07092 1604 aaPredicted RBP16.24■□□□□ 0.19
PFDN1-201ENST00000261813 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
PFDN1-201ENST00000261813 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
PFDN1-201ENST00000261813 PMFBP1Q8TBY8 1022 aa16.23■□□□□ 0.19
PFDN1-201ENST00000261813 JCADQ9P266 1359 aa16.23■□□□□ 0.19
PFDN1-201ENST00000261813 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
PFDN1-201ENST00000261813 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
PFDN1-201ENST00000261813 FOXO3O43524 673 aa16.21■□□□□ 0.19
PFDN1-201ENST00000261813 PXDNQ92626 1479 aa16.21■□□□□ 0.19
PFDN1-201ENST00000261813 SOS2Q07890 1332 aaPredicted RBP16.2■□□□□ 0.18
PFDN1-201ENST00000261813 NPHP3Q7Z494 1330 aa16.2■□□□□ 0.18
PFDN1-201ENST00000261813 PPIP5K1Q6PFW1 1433 aa16.2■□□□□ 0.18
PFDN1-201ENST00000261813 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
PFDN1-201ENST00000261813 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
PFDN1-201ENST00000261813 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
PFDN1-201ENST00000261813 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
PFDN1-201ENST00000261813 TMF1P82094 1093 aa16.18■□□□□ 0.18
PFDN1-201ENST00000261813 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
PFDN1-201ENST00000261813 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
PFDN1-201ENST00000261813 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
PFDN1-201ENST00000261813 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
PFDN1-201ENST00000261813 MIER1Q8N108 512 aa16.16■□□□□ 0.18
PFDN1-201ENST00000261813 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
PFDN1-201ENST00000261813 PUS7Q96PZ0 661 aaKnown RBP16.16■□□□□ 0.18
PFDN1-201ENST00000261813 ACEP12821 1306 aa16.16■□□□□ 0.18
PFDN1-201ENST00000261813 KRT28Q7Z3Y7 464 aa16.15■□□□□ 0.18
PFDN1-201ENST00000261813 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
PFDN1-201ENST00000261813 HAX1O00165 279 aa16.14■□□□□ 0.17
PFDN1-201ENST00000261813 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
PFDN1-201ENST00000261813 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
PFDN1-201ENST00000261813 PSME1Q06323 249 aa16.13■□□□□ 0.17
PFDN1-201ENST00000261813 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
PFDN1-201ENST00000261813 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
PFDN1-201ENST00000261813 PNPLA6Q8IY17 1366 aa16.12■□□□□ 0.17
PFDN1-201ENST00000261813 SHPRHQ149N8 1683 aa16.12■□□□□ 0.17
PFDN1-201ENST00000261813 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
PFDN1-201ENST00000261813 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
PFDN1-201ENST00000261813 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
PFDN1-201ENST00000261813 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
PFDN1-201ENST00000261813 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
PFDN1-201ENST00000261813 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
PFDN1-201ENST00000261813 USP6P35125 1406 aa16.1■□□□□ 0.17
PFDN1-201ENST00000261813 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
PFDN1-201ENST00000261813 NINLQ9Y2I6 1382 aa16.09■□□□□ 0.17
PFDN1-201ENST00000261813 MYOM1P52179 1685 aa16.09■□□□□ 0.17
PFDN1-201ENST00000261813 ALS2Q96Q42 1657 aa16.09■□□□□ 0.17
PFDN1-201ENST00000261813 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
PFDN1-201ENST00000261813 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.16
PFDN1-201ENST00000261813 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
PFDN1-201ENST00000261813 EVX2Q03828 476 aa16.07■□□□□ 0.16
PFDN1-201ENST00000261813 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
PFDN1-201ENST00000261813 NRKQ7Z2Y5 1582 aa16.06■□□□□ 0.16
PFDN1-201ENST00000261813 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
PFDN1-201ENST00000261813 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
PFDN1-201ENST00000261813 RXRBP28702 533 aa16.06■□□□□ 0.16
PFDN1-201ENST00000261813 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
PFDN1-201ENST00000261813 LRP6O75581 1613 aa16.06■□□□□ 0.16
PFDN1-201ENST00000261813 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
PFDN1-201ENST00000261813 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
PFDN1-201ENST00000261813 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
PFDN1-201ENST00000261813 LMOD2Q6P5Q4 547 aa16.05■□□□□ 0.16
PFDN1-201ENST00000261813 UPF1Q92900 1129 aaKnown RBP eCLIP16.05■□□□□ 0.167e-8■■■■■ 39
PFDN1-201ENST00000261813 ANKRD36BQ8N2N9 1353 aa16.04■□□□□ 0.16
PFDN1-201ENST00000261813 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
PFDN1-201ENST00000261813 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
PFDN1-201ENST00000261813 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
PFDN1-201ENST00000261813 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
PFDN1-201ENST00000261813 NUTM2BA6NNL0 878 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-201ENST00000261813 NUTM2EB1AL46 878 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-201ENST00000261813 NUTM2AQ8IVF1 878 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-201ENST00000261813 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
PFDN1-201ENST00000261813 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
PFDN1-201ENST00000261813 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
PFDN1-201ENST00000261813 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
PFDN1-201ENST00000261813 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 ABTB2Q8N961 1025 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
PFDN1-201ENST00000261813 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 CRYBG1Q9Y4K1 1723 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 CCDC7Q96M83 1385 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms