RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NUTM2BA6NNL0 878 aaPredicted RBP26.09■■□□□ 1.77
CYSTM1-201ENST00000261811 NUTM2EB1AL46 878 aaPredicted RBP26.09■■□□□ 1.77
CYSTM1-201ENST00000261811 NUTM2AQ8IVF1 878 aaPredicted RBP26.09■■□□□ 1.77
CYSTM1-201ENST00000261811 MARF1Q9Y4F3 1742 aaKnown RBP26.08■■□□□ 1.77
CYSTM1-201ENST00000261811 HAP1P54257 671 aaPredicted RBP26.08■■□□□ 1.77
CYSTM1-201ENST00000261811 USP6P35125 1406 aa26.07■■□□□ 1.76
CYSTM1-201ENST00000261811 ILDR2Q71H61 639 aa26.07■■□□□ 1.76
CYSTM1-201ENST00000261811 KTN1Q86UP2 1357 aaKnown RBP26.06■■□□□ 1.76
CYSTM1-201ENST00000261811 PHF23Q9BUL5 403 aaPredicted RBP26.06■■□□□ 1.76
CYSTM1-201ENST00000261811 SLC12A5Q9H2X9 1139 aa26.05■■□□□ 1.76
CYSTM1-201ENST00000261811 CPSF1Q10570 1443 aaKnown RBP26.04■■□□□ 1.76
CYSTM1-201ENST00000261811 ABTB2Q8N961 1025 aa26.03■■□□□ 1.76
CYSTM1-201ENST00000261811 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
CYSTM1-201ENST00000261811 POLR3GLQ9BT43 218 aa26.02■■□□□ 1.76
CYSTM1-201ENST00000261811 MYOM1P52179 1685 aa26■■□□□ 1.75
CYSTM1-201ENST00000261811 LRP6O75581 1613 aa26■■□□□ 1.75
CYSTM1-201ENST00000261811 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
CYSTM1-201ENST00000261811 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
CYSTM1-201ENST00000261811 NLRP13Q86W25 1043 aa25.99■■□□□ 1.75
CYSTM1-201ENST00000261811 CD163L1Q9NR16 1453 aa25.98■■□□□ 1.75
CYSTM1-201ENST00000261811 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
CYSTM1-201ENST00000261811 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
CYSTM1-201ENST00000261811 ADAMTS2O95450 1211 aa25.97■■□□□ 1.75
CYSTM1-201ENST00000261811 CRYBG1Q9Y4K1 1723 aa25.97■■□□□ 1.75
CYSTM1-201ENST00000261811 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
CYSTM1-201ENST00000261811 TTC21BQ7Z4L5 1316 aa25.96■■□□□ 1.75
CYSTM1-201ENST00000261811 PLEKHG5O94827 1062 aa25.96■■□□□ 1.75
CYSTM1-201ENST00000261811 SSH2Q76I76 1423 aa25.96■■□□□ 1.75
CYSTM1-201ENST00000261811 PIK3C2AO00443 1686 aa25.95■■□□□ 1.74
CYSTM1-201ENST00000261811 PHRF1Q9P1Y6 1649 aaKnown RBP25.95■■□□□ 1.74
CYSTM1-201ENST00000261811 NLRP6P59044 892 aa25.93■■□□□ 1.74
CYSTM1-201ENST00000261811 NUTM2GQ5VZR2 741 aa25.93■■□□□ 1.74
CYSTM1-201ENST00000261811 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
CYSTM1-201ENST00000261811 C8orf37Q96NL8 207 aa25.93■■□□□ 1.74
CYSTM1-201ENST00000261811 NGLY1Q96IV0 654 aa25.92■■□□□ 1.74
CYSTM1-201ENST00000261811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.91■■□□□ 1.74
CYSTM1-201ENST00000261811 KIF20BQ96Q89 1820 aa25.9■■□□□ 1.74
CYSTM1-201ENST00000261811 ZNF772Q68DY9 489 aaPredicted RBP25.89■■□□□ 1.74
CYSTM1-201ENST00000261811 USP54Q70EL1 1684 aa25.89■■□□□ 1.73
CYSTM1-201ENST00000261811 COL14A1Q05707 1796 aaKnown RBP25.86■■□□□ 1.73
CYSTM1-201ENST00000261811 USP19O94966 1318 aa25.86■■□□□ 1.73
CYSTM1-201ENST00000261811 NWD2Q9ULI1 1742 aa25.86■■□□□ 1.73
CYSTM1-201ENST00000261811 KCNH5Q8NCM2 988 aa25.86■■□□□ 1.73
CYSTM1-201ENST00000261811 AFF2P51816 1311 aa25.85■■□□□ 1.73
CYSTM1-201ENST00000261811 KIF7Q2M1P5 1343 aa25.85■■□□□ 1.73
CYSTM1-201ENST00000261811 PLCH1Q4KWH8 1693 aa25.85■■□□□ 1.73
CYSTM1-201ENST00000261811 C11orf95C9JLR9 678 aaPredicted RBP25.85■■□□□ 1.73
CYSTM1-201ENST00000261811 SOCS7O14512 581 aa25.85■■□□□ 1.73
CYSTM1-201ENST00000261811 USP31Q70CQ4 1352 aa25.83■■□□□ 1.73
CYSTM1-201ENST00000261811 GCP02774 474 aa25.83■■□□□ 1.73
CYSTM1-201ENST00000261811 SLIT3O75094 1523 aa25.83■■□□□ 1.72
CYSTM1-201ENST00000261811 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.82■■□□□ 1.72
CYSTM1-201ENST00000261811 NME9Q86XW9 330 aa25.82■■□□□ 1.72
CYSTM1-201ENST00000261811 PRDM11Q9NQV5 511 aa25.82■■□□□ 1.72
CYSTM1-201ENST00000261811 FNBP4Q8N3X1 1017 aaPredicted RBP25.81■■□□□ 1.72
CYSTM1-201ENST00000261811 COG3Q96JB2 828 aa25.81■■□□□ 1.72
CYSTM1-201ENST00000261811 USP21Q9UK80 565 aa25.81■■□□□ 1.72
CYSTM1-201ENST00000261811 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
CYSTM1-201ENST00000261811 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
CYSTM1-201ENST00000261811 NSD3Q9BZ95 1437 aa25.79■■□□□ 1.72
CYSTM1-201ENST00000261811 PANK3Q9H999 370 aa25.79■■□□□ 1.72
CYSTM1-201ENST00000261811 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
CYSTM1-201ENST00000261811 CPDO75976 1380 aa25.78■■□□□ 1.72
CYSTM1-201ENST00000261811 KIAA0232Q92628 1395 aa25.78■■□□□ 1.72
CYSTM1-201ENST00000261811 FAM83GA6ND36 823 aa25.77■■□□□ 1.72
CYSTM1-201ENST00000261811 LTN1O94822 1766 aa25.77■■□□□ 1.72
CYSTM1-201ENST00000261811 SLIT2O94813 1529 aa25.76■■□□□ 1.71
CYSTM1-201ENST00000261811 RGS17Q9UGC6 210 aaPredicted RBP25.76■■□□□ 1.71
CYSTM1-201ENST00000261811 ANKRD26Q9UPS8 1709 aa25.75■■□□□ 1.71
CYSTM1-201ENST00000261811 WASHC2AQ641Q2 1341 aa25.75■■□□□ 1.71
CYSTM1-201ENST00000261811 CARD14Q9BXL6 1004 aa25.75■■□□□ 1.71
CYSTM1-201ENST00000261811 TRPC5Q9UL62 973 aaPredicted RBP25.75■■□□□ 1.71
CYSTM1-201ENST00000261811 OVOS2A0A0J9YW53 1432 aa25.74■■□□□ 1.71
CYSTM1-201ENST00000261811 OVOS2Q6IE36 1432 aa25.74■■□□□ 1.71
CYSTM1-201ENST00000261811 FYB1O15117 783 aa25.74■■□□□ 1.71
CYSTM1-201ENST00000261811 UNC5CLQ8IV45 518 aa25.74■■□□□ 1.71
CYSTM1-201ENST00000261811 SOX12O15370 315 aa25.73■■□□□ 1.71
CYSTM1-201ENST00000261811 QTRT2Q9H974 415 aaKnown RBP25.73■■□□□ 1.71
CYSTM1-201ENST00000261811 BTG4Q9NY30 223 aa25.73■■□□□ 1.71
CYSTM1-201ENST00000261811 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
CYSTM1-201ENST00000261811 KNSTRNQ9Y448 316 aa25.73■■□□□ 1.71
CYSTM1-201ENST00000261811 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
CYSTM1-201ENST00000261811 NRAPQ86VF7 1730 aa25.72■■□□□ 1.71
CYSTM1-201ENST00000261811 GGNBP2Q9H3C7 697 aa25.71■■□□□ 1.71
CYSTM1-201ENST00000261811 BCL9LQ86UU0 1499 aa25.71■■□□□ 1.71
CYSTM1-201ENST00000261811 NFAT5O94916 1531 aa25.7■■□□□ 1.71
CYSTM1-201ENST00000261811 CHRNA2Q15822 529 aa25.7■■□□□ 1.71
CYSTM1-201ENST00000261811 RGPD5Q99666 1765 aa25.7■■□□□ 1.7
CYSTM1-201ENST00000261811 RXRBP28702 533 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 EVA1CP58658 441 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 POTEAQ6S8J7 498 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 LMO7Q8WWI1 1683 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 ABCC6O95255 1503 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 NSD2O96028 1365 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 AATKQ6ZMQ8 1374 aa25.68■■□□□ 1.7
CYSTM1-201ENST00000261811 ARHGEF25Q86VW2 580 aa25.67■■□□□ 1.7
CYSTM1-201ENST00000261811 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
CYSTM1-201ENST00000261811 ATRNO75882 1429 aa25.67■■□□□ 1.7
CYSTM1-201ENST00000261811 COL18A1P39060 1754 aa25.66■■□□□ 1.7
CYSTM1-201ENST00000261811 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms