RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 NEXMIFQ5QGS0 1516 aa24.52■■□□□ 1.52
SCARB1-201ENST00000261693 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
SCARB1-201ENST00000261693 CT47B1P0C2W7 299 aaPredicted RBP24.51■■□□□ 1.51
SCARB1-201ENST00000261693 C22orf23Q9BZE7 217 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 ABCC11Q96J66 1382 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 RIPK4P57078 832 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 ARXQ96QS3 562 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 DDX19BQ9UMR2 479 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
SCARB1-201ENST00000261693 IDI1Q13907 227 aa24.5■■□□□ 1.51
SCARB1-201ENST00000261693 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
SCARB1-201ENST00000261693 FYB1O15117 783 aa24.49■■□□□ 1.51
SCARB1-201ENST00000261693 HDAC1Q13547 482 aaPredicted RBP24.49■■□□□ 1.51
SCARB1-201ENST00000261693 COL3A1P02461 1466 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-201ENST00000261693 PRAM1Q96QH2 718 aa24.46■■□□□ 1.51
SCARB1-201ENST00000261693 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
SCARB1-201ENST00000261693 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
SCARB1-201ENST00000261693 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
SCARB1-201ENST00000261693 GZF1Q9H116 711 aaPredicted RBP24.43■■□□□ 1.5
SCARB1-201ENST00000261693 ZBTB40Q9NUA8 1239 aa24.43■■□□□ 1.5
SCARB1-201ENST00000261693 FBLN1P23142 703 aa24.43■■□□□ 1.5
SCARB1-201ENST00000261693 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
SCARB1-201ENST00000261693 MYO5BQ9ULV0 1848 aa24.41■■□□□ 1.5
SCARB1-201ENST00000261693 LNPKQ9C0E8 428 aa24.41■■□□□ 1.5
SCARB1-201ENST00000261693 MCM4P33991 863 aa24.4■■□□□ 1.5
SCARB1-201ENST00000261693 IL16Q14005 1332 aa24.4■■□□□ 1.5
SCARB1-201ENST00000261693 CFAP74Q9C0B2 1584 aa24.4■■□□□ 1.5
SCARB1-201ENST00000261693 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
SCARB1-201ENST00000261693 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.49
SCARB1-201ENST00000261693 IPO8O15397 1037 aaKnown RBP24.38■■□□□ 1.49
SCARB1-201ENST00000261693 KIF16BQ96L93 1317 aa24.38■■□□□ 1.49
SCARB1-201ENST00000261693 ATAD2Q6PL18 1390 aa24.38■■□□□ 1.49
SCARB1-201ENST00000261693 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
SCARB1-201ENST00000261693 CABP1Q9NZU7 370 aa24.37■■□□□ 1.49
SCARB1-201ENST00000261693 PTPRMP28827 1452 aa24.37■■□□□ 1.49
SCARB1-201ENST00000261693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.492e-8■□□□□ 8.6
SCARB1-201ENST00000261693 CHMP5Q9NZZ3 219 aa24.37■■□□□ 1.49
SCARB1-201ENST00000261693 HDGFL2Q7Z4V5 671 aaPredicted RBP24.36■■□□□ 1.49
SCARB1-201ENST00000261693 PRKAR2BP31323 418 aa24.35■■□□□ 1.49
SCARB1-201ENST00000261693 NUCB1Q02818 461 aa24.35■■□□□ 1.49
SCARB1-201ENST00000261693 HSCBQ8IWL3 235 aa24.35■■□□□ 1.49
SCARB1-201ENST00000261693 CDK19Q9BWU1 502 aa24.35■■□□□ 1.49
SCARB1-201ENST00000261693 THUMPD2Q9BTF0 503 aaKnown RBP24.35■■□□□ 1.49
SCARB1-201ENST00000261693 ANKRD26Q9UPS8 1709 aa24.34■■□□□ 1.49
SCARB1-201ENST00000261693 C1orf115Q9H7X2 142 aa24.33■■□□□ 1.49
SCARB1-201ENST00000261693 SLC52A1Q9NWF4 448 aa24.33■■□□□ 1.49
SCARB1-201ENST00000261693 HMOX1P09601 288 aa24.32■■□□□ 1.48
SCARB1-201ENST00000261693 CHD1LQ86WJ1 897 aa24.32■■□□□ 1.48
SCARB1-201ENST00000261693 PNNQ9H307 717 aaKnown RBP24.32■■□□□ 1.48
SCARB1-201ENST00000261693 YTHDC2Q9H6S0 1430 aaKnown RBP24.32■■□□□ 1.48
SCARB1-201ENST00000261693 EIF5BO60841 1220 aaKnown RBP24.32■■□□□ 1.48
SCARB1-201ENST00000261693 GOLGA6L3A6NEY3 463 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 FCHSD2O94868 740 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
SCARB1-201ENST00000261693 ALDH1L2Q3SY69 923 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 PNPLA6Q8IY17 1366 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 ZFYVE9O95405 1425 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 ELL2O00472 640 aaPredicted RBP24.31■■□□□ 1.48
SCARB1-201ENST00000261693 TRAK2O60296 914 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 PHACTR3Q96KR7 559 aa24.31■■□□□ 1.48
SCARB1-201ENST00000261693 LRRC7Q96NW7 1537 aa24.3■■□□□ 1.48
SCARB1-201ENST00000261693 FBXO31Q5XUX0 539 aaPredicted RBP24.3■■□□□ 1.48
SCARB1-201ENST00000261693 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
SCARB1-201ENST00000261693 MED14O60244 1454 aa24.29■■□□□ 1.48
SCARB1-201ENST00000261693 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
SCARB1-201ENST00000261693 RRAGDQ9NQL2 400 aaPredicted RBP24.29■■□□□ 1.48
SCARB1-201ENST00000261693 ARHGAP31Q2M1Z3 1444 aa24.28■■□□□ 1.48
SCARB1-201ENST00000261693 TSPYL6Q8N831 410 aa24.28■■□□□ 1.48
SCARB1-201ENST00000261693 PANK2Q9BZ23 570 aa24.28■■□□□ 1.48
SCARB1-201ENST00000261693 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
SCARB1-201ENST00000261693 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-201ENST00000261693 RBM25P49756 843 aaKnown RBP24.27■■□□□ 1.48
SCARB1-201ENST00000261693 TMEM131LA2VDJ0 1609 aa24.26■■□□□ 1.47
SCARB1-201ENST00000261693 YEATS2Q9ULM3 1422 aa24.26■■□□□ 1.47
SCARB1-201ENST00000261693 KIF20BQ96Q89 1820 aa24.26■■□□□ 1.47
SCARB1-201ENST00000261693 FSD2A1L4K1 749 aa24.25■■□□□ 1.47
SCARB1-201ENST00000261693 ZBTB7BO15156 539 aaPredicted RBP24.25■■□□□ 1.47
SCARB1-201ENST00000261693 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
SCARB1-201ENST00000261693 VAMP4O75379 141 aa24.25■■□□□ 1.47
SCARB1-201ENST00000261693 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
SCARB1-201ENST00000261693 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
SCARB1-201ENST00000261693 STAG3Q9UJ98 1225 aa24.24■■□□□ 1.47
SCARB1-201ENST00000261693 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
SCARB1-201ENST00000261693 MRPL50Q8N5N7 158 aaKnown RBP24.23■■□□□ 1.47
SCARB1-201ENST00000261693 EMILIN1Q9Y6C2 1016 aa24.23■■□□□ 1.47
SCARB1-201ENST00000261693 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
SCARB1-201ENST00000261693 NFE2L2Q16236 605 aa24.22■■□□□ 1.47
SCARB1-201ENST00000261693 BMP2KLQ5H9B9 411 aa24.22■■□□□ 1.47
SCARB1-201ENST00000261693 FOXD4L1Q9NU39 408 aa24.22■■□□□ 1.47
SCARB1-201ENST00000261693 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
SCARB1-201ENST00000261693 ARHGEF40Q8TER5 1519 aa24.22■■□□□ 1.47
SCARB1-201ENST00000261693 HSP90AB1P08238 724 aaKnown RBP24.22■■□□□ 1.47
SCARB1-201ENST00000261693 NEO1Q92859 1461 aa24.21■■□□□ 1.47
SCARB1-201ENST00000261693 ALKQ9UM73 1620 aa24.2■■□□□ 1.47
SCARB1-201ENST00000261693 DDIT3P35638 169 aa24.2■■□□□ 1.46
SCARB1-201ENST00000261693 MBIPQ9NS73 344 aa24.2■■□□□ 1.46
SCARB1-201ENST00000261693 SIRT2Q8IXJ6 389 aa24.19■■□□□ 1.46
SCARB1-201ENST00000261693 SNX21Q969T3 373 aa24.19■■□□□ 1.46
SCARB1-201ENST00000261693 NCOA3Q9Y6Q9 1424 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms