RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 TSC1Q92574 1164 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
PALB2-201ENST00000261584 UQCRHP07919 91 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
PALB2-201ENST00000261584 IGSF3O75054 1194 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 USP19O94966 1318 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 RAPGEF3O95398 923 aa12.38□□□□□ -0.43
PALB2-201ENST00000261584 PPFIA3O75145 1194 aa12.37□□□□□ -0.43
PALB2-201ENST00000261584 PKP1Q13835 747 aa12.37□□□□□ -0.43
PALB2-201ENST00000261584 CHMP4BQ9H444 224 aaKnown RBP12.37□□□□□ -0.43
PALB2-201ENST00000261584 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
PALB2-201ENST00000261584 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
PALB2-201ENST00000261584 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
PALB2-201ENST00000261584 BCORL1Q5H9F3 1711 aa12.36□□□□□ -0.43
PALB2-201ENST00000261584 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
PALB2-201ENST00000261584 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
PALB2-201ENST00000261584 KDM4AO75164 1064 aa12.35□□□□□ -0.43
PALB2-201ENST00000261584 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
PALB2-201ENST00000261584 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
PALB2-201ENST00000261584 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
PALB2-201ENST00000261584 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
PALB2-201ENST00000261584 ZBTB9Q96C00 473 aa12.35□□□□□ -0.43
PALB2-201ENST00000261584 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
PALB2-201ENST00000261584 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
PALB2-201ENST00000261584 CLCN1P35523 988 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
PALB2-201ENST00000261584 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
PALB2-201ENST00000261584 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
PALB2-201ENST00000261584 TXNDC2Q86VQ3 553 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 COG3Q96JB2 828 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 NUCB2P80303 420 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
PALB2-201ENST00000261584 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.34□□□□□ -0.43
PALB2-201ENST00000261584 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
PALB2-201ENST00000261584 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
PALB2-201ENST00000261584 HMMRO75330 724 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 REC8O95072 547 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 WDR62O43379 1518 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 AMPHP49418 695 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 NME9Q86XW9 330 aa12.33□□□□□ -0.44
PALB2-201ENST00000261584 MAGI2Q86UL8 1455 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 CBX1P83916 185 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 TSPYL4Q9UJ04 414 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 GNAI1P63096 354 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
PALB2-201ENST00000261584 USP25Q9UHP3 1055 aa12.32□□□□□ -0.44
PALB2-201ENST00000261584 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
PALB2-201ENST00000261584 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
PALB2-201ENST00000261584 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
PALB2-201ENST00000261584 A2MP01023 1474 aa12.31□□□□□ -0.44
PALB2-201ENST00000261584 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
PALB2-201ENST00000261584 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
PALB2-201ENST00000261584 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
PALB2-201ENST00000261584 STK3Q13188 491 aa12.3□□□□□ -0.44
PALB2-201ENST00000261584 ZRSR1Q15695 479 aaKnown RBP12.3□□□□□ -0.44
PALB2-201ENST00000261584 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
PALB2-201ENST00000261584 CAMK4Q16566 473 aa12.3□□□□□ -0.44
PALB2-201ENST00000261584 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
PALB2-201ENST00000261584 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
PALB2-201ENST00000261584 RABEP1Q15276 862 aa12.29□□□□□ -0.44
PALB2-201ENST00000261584 NGDNQ8NEJ9 315 aaKnown RBP12.29□□□□□ -0.44
PALB2-201ENST00000261584 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
PALB2-201ENST00000261584 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
PALB2-201ENST00000261584 NUCB1Q02818 461 aa12.29□□□□□ -0.44
PALB2-201ENST00000261584 MEIS3Q99687 375 aa12.29□□□□□ -0.44
PALB2-201ENST00000261584 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
PALB2-201ENST00000261584 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
PALB2-201ENST00000261584 GCC1Q96CN9 775 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 ATP10BO94823 1461 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 PTMSP20962 102 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 AIMP1Q12904 312 aaKnown RBP12.28□□□□□ -0.44
PALB2-201ENST00000261584 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
PALB2-201ENST00000261584 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.44
PALB2-201ENST00000261584 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.44
PALB2-201ENST00000261584 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.44
PALB2-201ENST00000261584 IFT57Q9NWB7 429 aa12.27□□□□□ -0.44
PALB2-201ENST00000261584 ZNF521Q96K83 1311 aa12.27□□□□□ -0.44
PALB2-201ENST00000261584 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.44
PALB2-201ENST00000261584 SDSP20132 328 aa12.27□□□□□ -0.45
PALB2-201ENST00000261584 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.45
PALB2-201ENST00000261584 NOS1P29475 1434 aa12.27□□□□□ -0.45
PALB2-201ENST00000261584 CWC27Q6UX04 472 aaKnown RBP12.27□□□□□ -0.45
PALB2-201ENST00000261584 TSPY26PQ9H489 355 aa12.27□□□□□ -0.45
PALB2-201ENST00000261584 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
PALB2-201ENST00000261584 COL17A1Q9UMD9 1497 aaPredicted RBP12.26□□□□□ -0.45
PALB2-201ENST00000261584 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
PALB2-201ENST00000261584 FYB1O15117 783 aa12.26□□□□□ -0.45
PALB2-201ENST00000261584 ANXA1P04083 346 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms