RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 PTPRGP23470 1445 aa17.41■□□□□ 0.38
TBC1D1-201ENST00000261439 PDCP20941 246 aa17.41■□□□□ 0.38
TBC1D1-201ENST00000261439 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 MCM4P33991 863 aa17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 KIF21BO75037 1637 aa17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 ESPNB1AK53 854 aa17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 STK3Q13188 491 aa17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
TBC1D1-201ENST00000261439 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
TBC1D1-201ENST00000261439 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
TBC1D1-201ENST00000261439 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.37
TBC1D1-201ENST00000261439 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
TBC1D1-201ENST00000261439 EPS15P42566 896 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 STK38Q15208 465 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 CCDC112Q8NEF3 446 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 MSH5O43196 834 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 CFAP70Q5T0N1 1121 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 AXDND1Q5T1B0 1012 aaPredicted RBP17.38■□□□□ 0.37
TBC1D1-201ENST00000261439 LEKR1Q6ZMV7 388 aa17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 CTDP1Q9Y5B0 961 aaPredicted RBP17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 XBP1P17861 261 aa17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
TBC1D1-201ENST00000261439 CCP110O43303 1012 aa17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 GNAI2P04899 355 aa17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 CALRP27797 417 aaKnown RBP17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 SERPINC1P01008 464 aa17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
TBC1D1-201ENST00000261439 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 TSPYL1Q9H0U9 437 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 IGF1RP08069 1367 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 SMARCE1Q969G3 411 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 CUX1P39880 1505 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 MVPQ14764 893 aaKnown RBP17.35■□□□□ 0.37
TBC1D1-201ENST00000261439 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 ZFYVE27Q5T4F4 411 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 ODF2Q5BJF6 829 aa17.34■□□□□ 0.37
TBC1D1-201ENST00000261439 ME1P48163 572 aa17.33■□□□□ 0.36
TBC1D1-201ENST00000261439 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
TBC1D1-201ENST00000261439 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
TBC1D1-201ENST00000261439 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
TBC1D1-201ENST00000261439 HIP1O00291 1037 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 LRRCC1Q9C099 1032 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 NLRP6P59044 892 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 KRT85P78386 507 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 NCOA2Q15596 1464 aa17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
TBC1D1-201ENST00000261439 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
TBC1D1-201ENST00000261439 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
TBC1D1-201ENST00000261439 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
TBC1D1-201ENST00000261439 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
TBC1D1-201ENST00000261439 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
TBC1D1-201ENST00000261439 SYCE3A1L190 88 aa17.3■□□□□ 0.36
TBC1D1-201ENST00000261439 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
TBC1D1-201ENST00000261439 SIL1Q9H173 461 aa17.29■□□□□ 0.36
TBC1D1-201ENST00000261439 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
TBC1D1-201ENST00000261439 FILIP1Q7Z7B0 1213 aa17.29■□□□□ 0.36
TBC1D1-201ENST00000261439 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
TBC1D1-201ENST00000261439 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
TBC1D1-201ENST00000261439 ERICH4A6NGS2 130 aa17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 ZSCAN30Q86W11 494 aa17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 PPFIBP1Q86W92 1011 aa17.28■□□□□ 0.36
TBC1D1-201ENST00000261439 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
TBC1D1-201ENST00000261439 SPATA32Q96LK8 384 aa17.27■□□□□ 0.36
TBC1D1-201ENST00000261439 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 TXLNAP40222 546 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 PLCD4Q9BRC7 762 aa17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
TBC1D1-201ENST00000261439 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
TBC1D1-201ENST00000261439 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
TBC1D1-201ENST00000261439 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
TBC1D1-201ENST00000261439 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms